Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC7.77□□□□□ -1.17
Ddx56Q9D0R4 Gm24046-201ENSMUST00000083111 165 ntBASIC7.77□□□□□ -1.17
Ddx56Q9D0R4 Rps12-ps3-201ENSMUST00000086764 494 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Ddx56Q9D0R4 Gm18726-201ENSMUST00000218175 2010 ntBASIC7.77□□□□□ -1.17
Ddx56Q9D0R4 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Ddx56Q9D0R4 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC7.77□□□□□ -1.17
Ddx56Q9D0R4 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Ddx56Q9D0R4 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Ddx56Q9D0R4 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC7.77□□□□□ -1.17
Ddx56Q9D0R4 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Ddx56Q9D0R4 Lrrfip2-206ENSMUST00000197241 1500 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Ddx56Q9D0R4 Gm18537-202ENSMUST00000206215 1503 ntBASIC7.77□□□□□ -1.17
Ddx56Q9D0R4 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Ddx56Q9D0R4 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Ddx56Q9D0R4 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Ddx56Q9D0R4 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Ddx56Q9D0R4 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Ddx56Q9D0R4 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Ddx56Q9D0R4 Gm10623-201ENSMUST00000209081 2639 ntBASIC7.76□□□□□ -1.17
Ddx56Q9D0R4 Gm22438-201ENSMUST00000104049 132 ntBASIC7.76□□□□□ -1.17
Ddx56Q9D0R4 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Ddx56Q9D0R4 Gm15048-201ENSMUST00000118201 954 ntBASIC7.76□□□□□ -1.17
Ddx56Q9D0R4 Gm11688-201ENSMUST00000122145 308 ntBASIC7.76□□□□□ -1.17
Ddx56Q9D0R4 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Ddx56Q9D0R4 Gm22795-201ENSMUST00000157233 118 ntBASIC7.76□□□□□ -1.17
Ddx56Q9D0R4 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Ddx56Q9D0R4 Gm6428-201ENSMUST00000161062 345 ntBASIC7.76□□□□□ -1.17
Ddx56Q9D0R4 Gm3650-201ENSMUST00000180600 747 ntBASIC7.76□□□□□ -1.17
Ddx56Q9D0R4 Gm28871-201ENSMUST00000186191 687 ntBASIC7.76□□□□□ -1.17
Ddx56Q9D0R4 Gm20918-202ENSMUST00000188637 1227 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Ddx56Q9D0R4 Gm37225-201ENSMUST00000193423 325 ntBASIC7.76□□□□□ -1.17
Ddx56Q9D0R4 Gm35108-201ENSMUST00000194321 699 ntBASIC7.76□□□□□ -1.17
Ddx56Q9D0R4 Gm38305-201ENSMUST00000194825 223 ntBASIC7.76□□□□□ -1.17
Ddx56Q9D0R4 Gm33191-201ENSMUST00000195604 699 ntBASIC7.76□□□□□ -1.17
Ddx56Q9D0R4 Gm43235-201ENSMUST00000200121 297 ntBASIC7.76□□□□□ -1.17
Ddx56Q9D0R4 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC7.76□□□□□ -1.17
Ddx56Q9D0R4 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Ddx56Q9D0R4 AC157571.1-201ENSMUST00000222014 520 ntBASIC7.76□□□□□ -1.17
Ddx56Q9D0R4 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Ddx56Q9D0R4 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Ddx56Q9D0R4 Desi2-202ENSMUST00000069568 1193 ntBASIC7.76□□□□□ -1.17
Ddx56Q9D0R4 Rpl27a-ps1-201ENSMUST00000075382 448 ntBASIC7.76□□□□□ -1.17
Ddx56Q9D0R4 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Ddx56Q9D0R4 Gm24613-201ENSMUST00000083266 130 ntBASIC7.76□□□□□ -1.17
Ddx56Q9D0R4 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Ddx56Q9D0R4 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Ddx56Q9D0R4 Gm6493-201ENSMUST00000159889 1786 ntBASIC7.76□□□□□ -1.17
Ddx56Q9D0R4 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC7.76□□□□□ -1.17
Ddx56Q9D0R4 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
Ddx56Q9D0R4 Slc17a3-202ENSMUST00000091698 1759 ntTSL 5 BASIC7.76□□□□□ -1.17
Ddx56Q9D0R4 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Ddx56Q9D0R4 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC7.76□□□□□ -1.17
Ddx56Q9D0R4 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 Wdr44-201ENSMUST00000035766 4167 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 Tnfaip6-201ENSMUST00000065927 1710 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 Gm43769-201ENSMUST00000201871 4323 ntBASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 Drp2-203ENSMUST00000113226 3499 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 Arhgef3-202ENSMUST00000224981 3618 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 Gm23701-201ENSMUST00000103893 110 ntBASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 Defa-ps7-201ENSMUST00000117139 168 ntBASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 Gm6491-201ENSMUST00000118273 990 ntBASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 Gm12727-201ENSMUST00000119885 359 ntBASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 Gm16277-201ENSMUST00000143595 662 ntTSL 3 BASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 Gm26355-201ENSMUST00000158220 105 ntBASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 AI480526-201ENSMUST00000159072 957 ntTSL 2 BASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 Txn-ps1-201ENSMUST00000186385 309 ntBASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 Gm18349-201ENSMUST00000187440 904 ntBASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 Gm37724-201ENSMUST00000195240 1221 ntBASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 Gm20136-201ENSMUST00000207501 891 ntBASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 Gm8077-201ENSMUST00000209221 1024 ntBASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 Gm18562-201ENSMUST00000209949 915 ntBASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 1500002F19Rik-203ENSMUST00000211184 375 ntTSL 3 BASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 Gm46191-201ENSMUST00000218899 433 ntBASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 Zfp874a-208ENSMUST00000225479 1092 ntBASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 Cldn10-202ENSMUST00000071546 1031 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 Gm43328-201ENSMUST00000198544 1434 ntBASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 Parp6-202ENSMUST00000050483 2631 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 Ddx19b-201ENSMUST00000040241 6612 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC7.75□□□□□ -1.17
Ddx56Q9D0R4 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC7.75□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 103.9 ms