Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC6.72□□□□□ -1.33
Use1Q9CQ56 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Use1Q9CQ56 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Use1Q9CQ56 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Use1Q9CQ56 Mtm1-206ENSMUST00000114621 3257 ntTSL 5 BASIC6.72□□□□□ -1.33
Use1Q9CQ56 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Use1Q9CQ56 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Use1Q9CQ56 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Use1Q9CQ56 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Use1Q9CQ56 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC6.71□□□□□ -1.33
Use1Q9CQ56 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC6.71□□□□□ -1.33
Use1Q9CQ56 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Use1Q9CQ56 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Use1Q9CQ56 Gm37772-201ENSMUST00000191635 1394 ntBASIC6.71□□□□□ -1.33
Use1Q9CQ56 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
Use1Q9CQ56 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Use1Q9CQ56 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Use1Q9CQ56 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Use1Q9CQ56 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Use1Q9CQ56 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Use1Q9CQ56 Gm42994-201ENSMUST00000195964 2549 ntBASIC6.71□□□□□ -1.34
Use1Q9CQ56 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
Use1Q9CQ56 Gm8127-201ENSMUST00000163655 1427 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Use1Q9CQ56 Gm36930-201ENSMUST00000195431 2376 ntBASIC6.71□□□□□ -1.34
Use1Q9CQ56 Cdc42-201ENSMUST00000030417 1448 ntAPPRIS ALT1 TSL 2 BASIC6.71□□□□□ -1.34
Use1Q9CQ56 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Use1Q9CQ56 Rps27a-201ENSMUST00000102844 637 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Use1Q9CQ56 Gm25273-201ENSMUST00000104295 115 ntBASIC6.71□□□□□ -1.34
Use1Q9CQ56 Gstm7-203ENSMUST00000106688 783 ntTSL 2 BASIC6.71□□□□□ -1.34
Use1Q9CQ56 Cdk2ap1-203ENSMUST00000111473 715 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Use1Q9CQ56 Gm11245-201ENSMUST00000119419 1037 ntBASIC6.71□□□□□ -1.34
Use1Q9CQ56 Rps8-ps3-201ENSMUST00000121011 650 ntBASIC6.71□□□□□ -1.34
Use1Q9CQ56 Gm14787-201ENSMUST00000121236 388 ntBASIC6.71□□□□□ -1.34
Use1Q9CQ56 Gm23657-201ENSMUST00000122623 294 ntBASIC6.71□□□□□ -1.34
Use1Q9CQ56 2810403D21Rik-201ENSMUST00000123040 601 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Use1Q9CQ56 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Use1Q9CQ56 Zfp113-202ENSMUST00000132318 488 ntTSL 3 BASIC6.71□□□□□ -1.34
Use1Q9CQ56 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC6.71□□□□□ -1.34
Use1Q9CQ56 Wdr83os-202ENSMUST00000140621 630 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Use1Q9CQ56 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC6.71□□□□□ -1.34
Use1Q9CQ56 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Use1Q9CQ56 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC6.71□□□□□ -1.34
Use1Q9CQ56 Gm5920-201ENSMUST00000187390 853 ntBASIC6.71□□□□□ -1.34
Use1Q9CQ56 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Use1Q9CQ56 Gm37506-201ENSMUST00000192008 143 ntBASIC6.71□□□□□ -1.34
Use1Q9CQ56 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Use1Q9CQ56 Gm18060-201ENSMUST00000207407 564 ntBASIC6.71□□□□□ -1.34
Use1Q9CQ56 Gm16475-202ENSMUST00000209033 528 ntBASIC6.71□□□□□ -1.34
Use1Q9CQ56 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Use1Q9CQ56 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC6.71□□□□□ -1.34
Use1Q9CQ56 CT009711.4-201ENSMUST00000225685 198 ntBASIC6.71□□□□□ -1.34
Use1Q9CQ56 Ifitm5-201ENSMUST00000026562 765 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Use1Q9CQ56 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Use1Q9CQ56 Commd3-201ENSMUST00000061158 935 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Use1Q9CQ56 Krtap8-1-201ENSMUST00000072280 579 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Use1Q9CQ56 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Use1Q9CQ56 Gm45061-201ENSMUST00000204395 2095 ntBASIC6.71□□□□□ -1.34
Use1Q9CQ56 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Use1Q9CQ56 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Use1Q9CQ56 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Use1Q9CQ56 Gm10388-201ENSMUST00000205001 2936 ntBASIC6.71□□□□□ -1.34
Use1Q9CQ56 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Use1Q9CQ56 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC6.71□□□□□ -1.34
Use1Q9CQ56 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC6.71□□□□□ -1.34
Use1Q9CQ56 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Use1Q9CQ56 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC6.71□□□□□ -1.34
Use1Q9CQ56 Gm36527-201ENSMUST00000195500 3029 ntBASIC6.71□□□□□ -1.34
Use1Q9CQ56 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Use1Q9CQ56 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Use1Q9CQ56 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Use1Q9CQ56 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Use1Q9CQ56 CT025675.1-201ENSMUST00000228171 1567 ntBASIC6.7□□□□□ -1.34
Use1Q9CQ56 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Use1Q9CQ56 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Use1Q9CQ56 Gm43707-201ENSMUST00000196451 3187 ntBASIC6.7□□□□□ -1.34
Use1Q9CQ56 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Use1Q9CQ56 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Use1Q9CQ56 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Use1Q9CQ56 Gm43606-201ENSMUST00000195938 3556 ntBASIC6.7□□□□□ -1.34
Use1Q9CQ56 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Use1Q9CQ56 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Use1Q9CQ56 Gm28379-202ENSMUST00000187676 2896 ntBASIC6.7□□□□□ -1.34
Use1Q9CQ56 Gm22671-201ENSMUST00000104420 134 ntBASIC6.7□□□□□ -1.34
Use1Q9CQ56 Gm14630-201ENSMUST00000118057 246 ntBASIC6.7□□□□□ -1.34
Use1Q9CQ56 Gm14251-201ENSMUST00000122133 279 ntBASIC6.7□□□□□ -1.34
Use1Q9CQ56 Gm2709-201ENSMUST00000142979 350 ntBASIC6.7□□□□□ -1.34
Use1Q9CQ56 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Use1Q9CQ56 AI480526-201ENSMUST00000159072 957 ntTSL 2 BASIC6.7□□□□□ -1.34
Use1Q9CQ56 Gm4613-201ENSMUST00000165488 276 ntBASIC6.7□□□□□ -1.34
Use1Q9CQ56 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Use1Q9CQ56 Rbx1-ps-201ENSMUST00000173786 327 ntBASIC6.7□□□□□ -1.34
Use1Q9CQ56 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
Use1Q9CQ56 Nxf1-205ENSMUST00000183939 1017 ntTSL 5 BASIC6.7□□□□□ -1.34
Use1Q9CQ56 Gm20111-201ENSMUST00000184830 319 ntBASIC6.7□□□□□ -1.34
Use1Q9CQ56 Gm27458-201ENSMUST00000185108 121 ntBASIC6.7□□□□□ -1.34
Use1Q9CQ56 Gm28100-201ENSMUST00000186560 582 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Use1Q9CQ56 Avpr1b-202ENSMUST00000190410 623 ntTSL 5 BASIC6.7□□□□□ -1.34
Use1Q9CQ56 Gm38164-201ENSMUST00000192810 330 ntBASIC6.7□□□□□ -1.34
Use1Q9CQ56 Gm37328-201ENSMUST00000193191 640 ntBASIC6.7□□□□□ -1.34
Use1Q9CQ56 Gm37729-201ENSMUST00000194761 1172 ntBASIC6.7□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 94.1 ms