Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Il17f-201ENSMUST00000039046 1178 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Clrn1Q8K445 Snora9-201ENSMUST00000082579 133 ntBASIC6.99□□□□□ -1.29
Clrn1Q8K445 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Clrn1Q8K445 Gm8844-201ENSMUST00000119460 2614 ntBASIC6.99□□□□□ -1.29
Clrn1Q8K445 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Clrn1Q8K445 Parp11-201ENSMUST00000039680 3746 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Clrn1Q8K445 Olfr1278-205ENSMUST00000215210 6901 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Clrn1Q8K445 AC153564.1-201ENSMUST00000217771 3607 ntTSL 5 BASIC6.99□□□□□ -1.29
Clrn1Q8K445 Papss2-201ENSMUST00000025833 3635 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Clrn1Q8K445 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC6.99□□□□□ -1.29
Clrn1Q8K445 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Clrn1Q8K445 AC163040.2-201ENSMUST00000223462 3534 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Clrn1Q8K445 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Clrn1Q8K445 Skint7-204ENSMUST00000163281 1423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Clrn1Q8K445 Gm9839-201ENSMUST00000195252 1437 ntBASIC6.99□□□□□ -1.29
Clrn1Q8K445 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Clrn1Q8K445 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC6.99□□□□□ -1.29
Clrn1Q8K445 Arfgef1-203ENSMUST00000131556 3424 ntTSL 5 BASIC6.99□□□□□ -1.29
Clrn1Q8K445 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
Clrn1Q8K445 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC6.99□□□□□ -1.29
Clrn1Q8K445 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Clrn1Q8K445 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Clrn1Q8K445 Gm43526-201ENSMUST00000196666 1565 ntBASIC6.99□□□□□ -1.29
Clrn1Q8K445 Ermard-204ENSMUST00000097395 1593 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
Clrn1Q8K445 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Clrn1Q8K445 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC6.99□□□□□ -1.29
Clrn1Q8K445 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Clrn1Q8K445 A730049H05Rik-201ENSMUST00000057977 2239 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Clrn1Q8K445 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Clrn1Q8K445 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Clrn1Q8K445 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Clrn1Q8K445 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Clrn1Q8K445 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC6.98□□□□□ -1.29
Clrn1Q8K445 9630028H03Rik-201ENSMUST00000129868 2364 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Clrn1Q8K445 4930551I15Rik-201ENSMUST00000219700 2143 ntTSL 5 BASIC6.98□□□□□ -1.29
Clrn1Q8K445 AC135669.2-201ENSMUST00000215636 4958 ntBASIC6.98□□□□□ -1.29
Clrn1Q8K445 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Clrn1Q8K445 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Clrn1Q8K445 AC132596.1-201ENSMUST00000223043 2263 ntTSL 5 BASIC6.98□□□□□ -1.29
Clrn1Q8K445 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Clrn1Q8K445 AI427809-203ENSMUST00000123127 2033 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Clrn1Q8K445 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Clrn1Q8K445 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Clrn1Q8K445 Gm29660-201ENSMUST00000185631 2166 ntTSL 5 BASIC6.98□□□□□ -1.29
Clrn1Q8K445 Gm29309-201ENSMUST00000186251 2166 ntTSL 5 BASIC6.98□□□□□ -1.29
Clrn1Q8K445 Gm28317-201ENSMUST00000187200 2166 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Clrn1Q8K445 Gm28254-201ENSMUST00000189207 2166 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Clrn1Q8K445 Gm29063-201ENSMUST00000190236 2166 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Clrn1Q8K445 Gm29632-201ENSMUST00000190335 2166 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Clrn1Q8K445 Gm28538-201ENSMUST00000190919 2166 ntTSL 5 BASIC6.98□□□□□ -1.29
Clrn1Q8K445 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Clrn1Q8K445 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Clrn1Q8K445 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC6.98□□□□□ -1.29
Clrn1Q8K445 Asxl2-201ENSMUST00000092003 11934 ntTSL 5 BASIC6.98□□□□□ -1.29
Clrn1Q8K445 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Clrn1Q8K445 Gm23323-201ENSMUST00000104471 133 ntBASIC6.98□□□□□ -1.29
Clrn1Q8K445 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC6.98□□□□□ -1.29
Clrn1Q8K445 Cldn16-201ENSMUST00000115302 950 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Clrn1Q8K445 Cav1-205ENSMUST00000115456 995 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
Clrn1Q8K445 Gm22152-201ENSMUST00000116966 125 ntBASIC6.98□□□□□ -1.29
Clrn1Q8K445 Gm6491-201ENSMUST00000118273 990 ntBASIC6.98□□□□□ -1.29
Clrn1Q8K445 Gm14745-201ENSMUST00000118480 1096 ntBASIC6.98□□□□□ -1.29
Clrn1Q8K445 Gm15665-201ENSMUST00000119116 847 ntBASIC6.98□□□□□ -1.29
Clrn1Q8K445 Gm12219-201ENSMUST00000119198 443 ntBASIC6.98□□□□□ -1.29
Clrn1Q8K445 Defa33-201ENSMUST00000120874 426 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Clrn1Q8K445 Babam2-205ENSMUST00000131995 1220 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Clrn1Q8K445 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Clrn1Q8K445 Gm24011-201ENSMUST00000157732 268 ntBASIC6.98□□□□□ -1.29
Clrn1Q8K445 Defa2-201ENSMUST00000170275 426 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Clrn1Q8K445 Gm26738-201ENSMUST00000181312 601 ntBASIC6.98□□□□□ -1.29
Clrn1Q8K445 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Clrn1Q8K445 Gm5181-201ENSMUST00000183140 971 ntBASIC6.98□□□□□ -1.29
Clrn1Q8K445 Mir6403-201ENSMUST00000185007 129 ntBASIC6.98□□□□□ -1.29
Clrn1Q8K445 Gm6610-201ENSMUST00000186324 358 ntBASIC6.98□□□□□ -1.29
Clrn1Q8K445 Gm28466-201ENSMUST00000190678 659 ntBASIC6.98□□□□□ -1.29
Clrn1Q8K445 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC6.98□□□□□ -1.29
Clrn1Q8K445 Gm43590-201ENSMUST00000195987 387 ntBASIC6.98□□□□□ -1.29
Clrn1Q8K445 Gm21461-201ENSMUST00000200382 863 ntBASIC6.98□□□□□ -1.29
Clrn1Q8K445 Gm19596-201ENSMUST00000203685 739 ntBASIC6.98□□□□□ -1.29
Clrn1Q8K445 Gm44196-202ENSMUST00000204186 812 ntTSL 3 BASIC6.98□□□□□ -1.29
Clrn1Q8K445 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC6.98□□□□□ -1.29
Clrn1Q8K445 E230032D23Rik-203ENSMUST00000208797 856 ntBASIC6.98□□□□□ -1.29
Clrn1Q8K445 Gm45693-201ENSMUST00000211391 1157 ntBASIC6.98□□□□□ -1.29
Clrn1Q8K445 Platr25-208ENSMUST00000222602 939 ntBASIC6.98□□□□□ -1.29
Clrn1Q8K445 CT010480.1-201ENSMUST00000223612 363 ntBASIC6.98□□□□□ -1.29
Clrn1Q8K445 Zfp874a-208ENSMUST00000225479 1092 ntBASIC6.98□□□□□ -1.29
Clrn1Q8K445 AC166822.1-201ENSMUST00000227667 636 ntBASIC6.98□□□□□ -1.29
Clrn1Q8K445 AC154323.1-201ENSMUST00000228329 1231 ntBASIC6.98□□□□□ -1.29
Clrn1Q8K445 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Clrn1Q8K445 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Clrn1Q8K445 Gm6807-201ENSMUST00000077435 888 ntBASIC6.98□□□□□ -1.29
Clrn1Q8K445 Gm22971-201ENSMUST00000083305 97 ntBASIC6.98□□□□□ -1.29
Clrn1Q8K445 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC6.98□□□□□ -1.29
Clrn1Q8K445 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Clrn1Q8K445 Itgam-202ENSMUST00000106240 3325 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Clrn1Q8K445 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Clrn1Q8K445 Cdc42-201ENSMUST00000030417 1448 ntAPPRIS ALT1 TSL 2 BASIC6.98□□□□□ -1.29
Clrn1Q8K445 Akap2-201ENSMUST00000043456 7211 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Clrn1Q8K445 Gm37364-201ENSMUST00000192533 3920 ntBASIC6.98□□□□□ -1.29
Clrn1Q8K445 C8a-203ENSMUST00000106808 3539 ntTSL 2 BASIC6.98□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms