Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cchcr1Q8K2I2 Lipt1-201ENSMUST00000041621 1485 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cchcr1Q8K2I2 Gm10855-201ENSMUST00000100426 2541 ntBASIC8.37□□□□□ -1.07
Cchcr1Q8K2I2 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cchcr1Q8K2I2 Gm36527-201ENSMUST00000195500 3029 ntBASIC8.37□□□□□ -1.07
Cchcr1Q8K2I2 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cchcr1Q8K2I2 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cchcr1Q8K2I2 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cchcr1Q8K2I2 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Cchcr1Q8K2I2 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Cchcr1Q8K2I2 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
Cchcr1Q8K2I2 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Cchcr1Q8K2I2 Lilra6-204ENSMUST00000206077 2281 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Cchcr1Q8K2I2 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Cchcr1Q8K2I2 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Cchcr1Q8K2I2 AC139758.3-201ENSMUST00000226853 2704 ntBASIC8.36□□□□□ -1.07
Cchcr1Q8K2I2 Ceacam1-208ENSMUST00000206676 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cchcr1Q8K2I2 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC8.36□□□□□ -1.07
Cchcr1Q8K2I2 Omg-201ENSMUST00000164465 2228 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cchcr1Q8K2I2 Serpina3a-202ENSMUST00000109965 1204 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Cchcr1Q8K2I2 Gm14893-201ENSMUST00000117904 282 ntBASIC8.36□□□□□ -1.07
Cchcr1Q8K2I2 Gm13137-201ENSMUST00000118035 345 ntBASIC8.36□□□□□ -1.07
Cchcr1Q8K2I2 Gm15158-201ENSMUST00000120577 570 ntBASIC8.36□□□□□ -1.07
Cchcr1Q8K2I2 Gm11383-201ENSMUST00000121346 807 ntBASIC8.36□□□□□ -1.07
Cchcr1Q8K2I2 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC8.36□□□□□ -1.07
Cchcr1Q8K2I2 Gm23276-201ENSMUST00000157913 138 ntBASIC8.36□□□□□ -1.07
Cchcr1Q8K2I2 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC8.36□□□□□ -1.07
Cchcr1Q8K2I2 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC8.36□□□□□ -1.07
Cchcr1Q8K2I2 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC8.36□□□□□ -1.07
Cchcr1Q8K2I2 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC8.36□□□□□ -1.07
Cchcr1Q8K2I2 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC8.36□□□□□ -1.07
Cchcr1Q8K2I2 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC8.36□□□□□ -1.07
Cchcr1Q8K2I2 C920008G01Rik-201ENSMUST00000196756 380 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Cchcr1Q8K2I2 Gm42673-201ENSMUST00000202676 337 ntBASIC8.36□□□□□ -1.07
Cchcr1Q8K2I2 Gm44971-201ENSMUST00000206192 337 ntBASIC8.36□□□□□ -1.07
Cchcr1Q8K2I2 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Cchcr1Q8K2I2 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC8.36□□□□□ -1.07
Cchcr1Q8K2I2 Gm18960-201ENSMUST00000222962 713 ntBASIC8.36□□□□□ -1.07
Cchcr1Q8K2I2 AC157650.2-201ENSMUST00000224666 328 ntBASIC8.36□□□□□ -1.07
Cchcr1Q8K2I2 AC154838.3-201ENSMUST00000228876 965 ntBASIC8.36□□□□□ -1.07
Cchcr1Q8K2I2 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Cchcr1Q8K2I2 Gm42885-201ENSMUST00000200763 4214 ntBASIC8.36□□□□□ -1.07
Cchcr1Q8K2I2 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Cchcr1Q8K2I2 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC8.36□□□□□ -1.07
Cchcr1Q8K2I2 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cchcr1Q8K2I2 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Cchcr1Q8K2I2 Gm6567-201ENSMUST00000205529 2095 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Cchcr1Q8K2I2 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Cchcr1Q8K2I2 Ccnb2-ps-202ENSMUST00000170898 2296 ntBASIC8.36□□□□□ -1.07
Cchcr1Q8K2I2 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Cchcr1Q8K2I2 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC8.35□□□□□ -1.07
Cchcr1Q8K2I2 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Cchcr1Q8K2I2 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Cchcr1Q8K2I2 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Cchcr1Q8K2I2 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Cchcr1Q8K2I2 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Cchcr1Q8K2I2 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Cchcr1Q8K2I2 Gm20768-201ENSMUST00000199527 2338 ntBASIC8.35□□□□□ -1.07
Cchcr1Q8K2I2 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Cchcr1Q8K2I2 Igkv8-30-201ENSMUST00000103378 368 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Cchcr1Q8K2I2 Gm15484-201ENSMUST00000118871 828 ntBASIC8.35□□□□□ -1.07
Cchcr1Q8K2I2 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Cchcr1Q8K2I2 Tvp23bos-201ENSMUST00000148598 1011 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Cchcr1Q8K2I2 Btf3-205ENSMUST00000152704 888 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Cchcr1Q8K2I2 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC8.35□□□□□ -1.07
Cchcr1Q8K2I2 Gm22948-201ENSMUST00000158561 243 ntBASIC8.35□□□□□ -1.07
Cchcr1Q8K2I2 Gpx2-ps1-201ENSMUST00000160622 571 ntBASIC8.35□□□□□ -1.07
Cchcr1Q8K2I2 Mir1231-201ENSMUST00000175639 81 ntBASIC8.35□□□□□ -1.07
Cchcr1Q8K2I2 Gm27401-201ENSMUST00000184052 173 ntBASIC8.35□□□□□ -1.07
Cchcr1Q8K2I2 Gm6610-201ENSMUST00000186324 358 ntBASIC8.35□□□□□ -1.07
Cchcr1Q8K2I2 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC8.35□□□□□ -1.07
Cchcr1Q8K2I2 Gm28142-201ENSMUST00000186899 698 ntBASIC8.35□□□□□ -1.07
Cchcr1Q8K2I2 Gm20917-202ENSMUST00000188706 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Cchcr1Q8K2I2 Gm37585-201ENSMUST00000195440 280 ntBASIC8.35□□□□□ -1.07
Cchcr1Q8K2I2 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Cchcr1Q8K2I2 Gm44140-201ENSMUST00000204157 675 ntTSL 3 BASIC8.35□□□□□ -1.07
Cchcr1Q8K2I2 Gm18484-201ENSMUST00000204389 991 ntBASIC8.35□□□□□ -1.07
Cchcr1Q8K2I2 A330076H08Rik-203ENSMUST00000208822 1164 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Cchcr1Q8K2I2 Gm19217-201ENSMUST00000218238 328 ntBASIC8.35□□□□□ -1.07
Cchcr1Q8K2I2 AC118006.3-201ENSMUST00000223948 1176 ntBASIC8.35□□□□□ -1.07
Cchcr1Q8K2I2 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Cchcr1Q8K2I2 Gm26130-201ENSMUST00000083171 138 ntBASIC8.35□□□□□ -1.07
Cchcr1Q8K2I2 Gpr15-201ENSMUST00000089318 1290 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Cchcr1Q8K2I2 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Cchcr1Q8K2I2 Olfr846-202ENSMUST00000214810 4342 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Cchcr1Q8K2I2 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Cchcr1Q8K2I2 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Cchcr1Q8K2I2 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Cchcr1Q8K2I2 Gm28667-201ENSMUST00000189873 2171 ntBASIC8.35□□□□□ -1.07
Cchcr1Q8K2I2 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Cchcr1Q8K2I2 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC8.35□□□□□ -1.07
Cchcr1Q8K2I2 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC8.35□□□□□ -1.07
Cchcr1Q8K2I2 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Cchcr1Q8K2I2 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Cchcr1Q8K2I2 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Cchcr1Q8K2I2 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC8.34□□□□□ -1.07
Cchcr1Q8K2I2 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Cchcr1Q8K2I2 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC8.34□□□□□ -1.07
Cchcr1Q8K2I2 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Cchcr1Q8K2I2 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 92.1 ms