Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC8.41□□□□□ -1.06
Nup88Q8CEC0 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Nup88Q8CEC0 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Nup88Q8CEC0 Gm16297-201ENSMUST00000161466 459 ntBASIC8.41□□□□□ -1.06
Nup88Q8CEC0 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC8.41□□□□□ -1.06
Nup88Q8CEC0 Gm20637-201ENSMUST00000175715 462 ntBASIC8.41□□□□□ -1.06
Nup88Q8CEC0 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC8.41□□□□□ -1.06
Nup88Q8CEC0 Gm7481-201ENSMUST00000182020 995 ntBASIC8.41□□□□□ -1.06
Nup88Q8CEC0 Gm28064-201ENSMUST00000185639 858 ntBASIC8.41□□□□□ -1.06
Nup88Q8CEC0 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC8.41□□□□□ -1.06
Nup88Q8CEC0 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC8.41□□□□□ -1.06
Nup88Q8CEC0 Gm37295-201ENSMUST00000192186 109 ntBASIC8.41□□□□□ -1.06
Nup88Q8CEC0 Gm17965-201ENSMUST00000193904 517 ntBASIC8.41□□□□□ -1.06
Nup88Q8CEC0 Gm37883-201ENSMUST00000194970 725 ntBASIC8.41□□□□□ -1.06
Nup88Q8CEC0 Gm43725-201ENSMUST00000200122 369 ntBASIC8.41□□□□□ -1.06
Nup88Q8CEC0 Gm45100-201ENSMUST00000209153 391 ntBASIC8.41□□□□□ -1.06
Nup88Q8CEC0 Olfr1345-ps1-201ENSMUST00000210627 244 ntBASIC8.41□□□□□ -1.06
Nup88Q8CEC0 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC8.41□□□□□ -1.06
Nup88Q8CEC0 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Nup88Q8CEC0 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC8.41□□□□□ -1.06
Nup88Q8CEC0 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC8.41□□□□□ -1.06
Nup88Q8CEC0 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Nup88Q8CEC0 AC157572.1-201ENSMUST00000227187 825 ntBASIC8.41□□□□□ -1.06
Nup88Q8CEC0 AC115735.5-201ENSMUST00000228386 397 ntBASIC8.41□□□□□ -1.06
Nup88Q8CEC0 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
Nup88Q8CEC0 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC8.41□□□□□ -1.06
Nup88Q8CEC0 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Nup88Q8CEC0 Mir484-201ENSMUST00000093566 67 ntBASIC8.41□□□□□ -1.06
Nup88Q8CEC0 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC8.41□□□□□ -1.06
Nup88Q8CEC0 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Nup88Q8CEC0 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Nup88Q8CEC0 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Nup88Q8CEC0 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Nup88Q8CEC0 Gm5702-201ENSMUST00000185629 2469 ntBASIC8.41□□□□□ -1.06
Nup88Q8CEC0 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Nup88Q8CEC0 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Nup88Q8CEC0 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Nup88Q8CEC0 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Nup88Q8CEC0 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Nup88Q8CEC0 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Nup88Q8CEC0 Sec24c-202ENSMUST00000223751 4196 ntBASIC8.4□□□□□ -1.06
Nup88Q8CEC0 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Nup88Q8CEC0 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC8.4□□□□□ -1.06
Nup88Q8CEC0 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Nup88Q8CEC0 Gm42597-201ENSMUST00000196663 1544 ntBASIC8.4□□□□□ -1.06
Nup88Q8CEC0 Gm43750-201ENSMUST00000199027 2493 ntBASIC8.4□□□□□ -1.06
Nup88Q8CEC0 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC8.4□□□□□ -1.06
Nup88Q8CEC0 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Nup88Q8CEC0 Gm43775-201ENSMUST00000201019 3395 ntBASIC8.4□□□□□ -1.06
Nup88Q8CEC0 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC8.4□□□□□ -1.06
Nup88Q8CEC0 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Nup88Q8CEC0 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Nup88Q8CEC0 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Nup88Q8CEC0 Gm12720-201ENSMUST00000123834 472 ntTSL 2 BASIC8.4□□□□□ -1.06
Nup88Q8CEC0 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Nup88Q8CEC0 Trav8-2-201ENSMUST00000130122 337 ntBASIC8.4□□□□□ -1.06
Nup88Q8CEC0 Cav1-209ENSMUST00000150901 380 ntTSL 2 BASIC8.4□□□□□ -1.06
Nup88Q8CEC0 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC8.4□□□□□ -1.06
Nup88Q8CEC0 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Nup88Q8CEC0 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Nup88Q8CEC0 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Nup88Q8CEC0 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Nup88Q8CEC0 Gm7341-201ENSMUST00000192183 926 ntBASIC8.4□□□□□ -1.06
Nup88Q8CEC0 Gm37689-201ENSMUST00000193139 275 ntBASIC8.4□□□□□ -1.06
Nup88Q8CEC0 Gm37349-201ENSMUST00000194205 624 ntBASIC8.4□□□□□ -1.06
Nup88Q8CEC0 Gm8539-201ENSMUST00000199822 501 ntBASIC8.4□□□□□ -1.06
Nup88Q8CEC0 Gm45725-201ENSMUST00000212962 337 ntBASIC8.4□□□□□ -1.06
Nup88Q8CEC0 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC8.4□□□□□ -1.06
Nup88Q8CEC0 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Nup88Q8CEC0 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Nup88Q8CEC0 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Nup88Q8CEC0 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Nup88Q8CEC0 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC8.4□□□□□ -1.06
Nup88Q8CEC0 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Nup88Q8CEC0 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Nup88Q8CEC0 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Nup88Q8CEC0 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Nup88Q8CEC0 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
Nup88Q8CEC0 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Nup88Q8CEC0 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
Nup88Q8CEC0 Gm6011-201ENSMUST00000211736 1796 ntBASIC8.4□□□□□ -1.07
Nup88Q8CEC0 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Nup88Q8CEC0 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Nup88Q8CEC0 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Nup88Q8CEC0 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
Nup88Q8CEC0 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Nup88Q8CEC0 Gm12346-201ENSMUST00000121455 2255 ntBASIC8.4□□□□□ -1.07
Nup88Q8CEC0 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Nup88Q8CEC0 Gm44895-201ENSMUST00000206670 1538 ntBASIC8.39□□□□□ -1.07
Nup88Q8CEC0 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Nup88Q8CEC0 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Nup88Q8CEC0 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Nup88Q8CEC0 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Nup88Q8CEC0 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Nup88Q8CEC0 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Nup88Q8CEC0 CT009604.1-201ENSMUST00000223900 1328 ntBASIC8.39□□□□□ -1.07
Nup88Q8CEC0 Asxl2-201ENSMUST00000092003 11934 ntTSL 5 BASIC8.39□□□□□ -1.07
Nup88Q8CEC0 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC8.39□□□□□ -1.07
Nup88Q8CEC0 Gm42653-201ENSMUST00000200644 2839 ntBASIC8.39□□□□□ -1.07
Nup88Q8CEC0 Gm15913-201ENSMUST00000118492 331 ntBASIC8.39□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms