Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Gm12375-201ENSMUST00000119331 921 ntBASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 Gm11617-201ENSMUST00000119609 639 ntBASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 Gm13508-201ENSMUST00000121639 775 ntBASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 Gm11897-201ENSMUST00000121976 828 ntBASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 Gm14813-201ENSMUST00000122291 395 ntBASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 Gm12320-201ENSMUST00000127333 1182 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 Gm1322-201ENSMUST00000134620 704 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 Gm15646-201ENSMUST00000143317 766 ntTSL 5 BASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 Gm14061-201ENSMUST00000155923 1007 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 Mymk-202ENSMUST00000163967 1210 ntTSL 3 BASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 Gm24080-201ENSMUST00000175178 232 ntBASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 6530411M01Rik-201ENSMUST00000181618 1033 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 AF067061-202ENSMUST00000181748 881 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 Gm27034-201ENSMUST00000182552 940 ntBASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 Gm9541-201ENSMUST00000188409 502 ntBASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 Gm23786-202ENSMUST00000200181 119 ntBASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 Gm7419-201ENSMUST00000209962 925 ntBASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 AC134607.1-201ENSMUST00000214707 485 ntBASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 Gm6150-201ENSMUST00000217775 577 ntBASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 AC154767.1-201ENSMUST00000224669 358 ntBASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 AC164879.1-201ENSMUST00000227904 1021 ntBASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 Frem3-201ENSMUST00000039695 6384 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 Olfr418-201ENSMUST00000059754 991 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 Olfr715-201ENSMUST00000076958 1131 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 Mir187-201ENSMUST00000083598 61 ntBASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 Tmem241-203ENSMUST00000092075 595 ntAPPRIS ALT2 TSL 3 BASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 Defa28-201ENSMUST00000098887 400 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 Gm42998-201ENSMUST00000197053 2371 ntBASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 CT571245.1-201ENSMUST00000218642 3465 ntBASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 AC164437.4-204ENSMUST00000227169 4024 ntBASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 Olfr1324-202ENSMUST00000215270 5679 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 Saxo2-205ENSMUST00000207693 1927 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 Tcf4-206ENSMUST00000114982 3694 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 AI427809-203ENSMUST00000123127 2033 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 Fer1l6-203ENSMUST00000161028 5714 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 Gm37150-201ENSMUST00000193900 2754 ntBASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 Hdlbp-202ENSMUST00000170883 6231 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 Klrb1c-203ENSMUST00000174404 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 Cd200r4-203ENSMUST00000176819 1796 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 Prepl-201ENSMUST00000072406 3294 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 Slc17a6-201ENSMUST00000032710 4137 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 Mical2-201ENSMUST00000037991 3352 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Pcdhb7Q8CDY9 Gm28469-201ENSMUST00000186374 2166 ntTSL 5 BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Gm28134-201ENSMUST00000188690 2166 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Gm37075-201ENSMUST00000191888 2166 ntTSL 5 BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Gm37574-201ENSMUST00000194264 2166 ntTSL 5 BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Gm17076-201ENSMUST00000165185 1401 ntBASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 AW146154-201ENSMUST00000098509 3411 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Cd36-206ENSMUST00000197890 2564 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Patj-206ENSMUST00000107033 3624 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Cyp17a1-201ENSMUST00000026012 1815 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Gpm6b-203ENSMUST00000112224 4644 ntAPPRIS ALT1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Tprkb-201ENSMUST00000067137 2103 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Kbtbd4-202ENSMUST00000111464 2343 ntAPPRIS ALT1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Commd8-201ENSMUST00000013693 3895 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Lars2-201ENSMUST00000038863 3894 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Pcbp2-202ENSMUST00000078404 2829 ntTSL 2 BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Meis1-209ENSMUST00000185131 3346 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Ighv14-2-201ENSMUST00000103467 351 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Ighv1-55-201ENSMUST00000103526 415 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 n-R5s51-201ENSMUST00000104473 123 ntBASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Tmsb15a-202ENSMUST00000113154 544 ntTSL 5 BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Atp5k-202ENSMUST00000118632 272 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Gm9434-201ENSMUST00000118975 813 ntBASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Gm12250-201ENSMUST00000119467 1274 ntBASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Gm12433-201ENSMUST00000119659 255 ntBASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Gm12361-201ENSMUST00000119806 1044 ntBASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Gm13367-201ENSMUST00000119955 796 ntBASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Gm13666-201ENSMUST00000120032 799 ntBASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Gm13808-201ENSMUST00000121353 184 ntBASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Rps14-203ENSMUST00000122279 667 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Gm22836-201ENSMUST00000158441 61 ntBASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Gm15849-201ENSMUST00000159257 335 ntTSL 3 BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 5730435O14Rik-202ENSMUST00000170047 617 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Zfp493-203ENSMUST00000181319 730 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Pea15b-202ENSMUST00000183185 555 ntBASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Gm28740-201ENSMUST00000186142 215 ntBASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Gm7654-201ENSMUST00000186738 683 ntBASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 Gm8976-201ENSMUST00000187136 703 ntBASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 1700003L19Rik-201ENSMUST00000190074 746 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Pcdhb7Q8CDY9 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms