Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Alx1Q8C8B0 Gm26645-201ENSMUST00000181076 1316 ntBASIC8.27□□□□□ -1.09
Alx1Q8C8B0 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Alx1Q8C8B0 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Alx1Q8C8B0 Akap7-201ENSMUST00000041984 2092 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Alx1Q8C8B0 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Alx1Q8C8B0 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Alx1Q8C8B0 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Alx1Q8C8B0 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
Alx1Q8C8B0 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Alx1Q8C8B0 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
Alx1Q8C8B0 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Alx1Q8C8B0 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC8.26□□□□□ -1.09
Alx1Q8C8B0 D630045J12Rik-201ENSMUST00000117556 10916 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Alx1Q8C8B0 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Alx1Q8C8B0 Morc2a-202ENSMUST00000096441 4594 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Alx1Q8C8B0 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Alx1Q8C8B0 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Alx1Q8C8B0 Gm11889-201ENSMUST00000118402 1079 ntBASIC8.26□□□□□ -1.09
Alx1Q8C8B0 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC8.26□□□□□ -1.09
Alx1Q8C8B0 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC8.26□□□□□ -1.09
Alx1Q8C8B0 Gm12535-201ENSMUST00000121025 484 ntBASIC8.26□□□□□ -1.09
Alx1Q8C8B0 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC8.26□□□□□ -1.09
Alx1Q8C8B0 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Alx1Q8C8B0 Gm14764-201ENSMUST00000147130 313 ntTSL 5 BASIC8.26□□□□□ -1.09
Alx1Q8C8B0 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC8.26□□□□□ -1.09
Alx1Q8C8B0 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Alx1Q8C8B0 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC8.26□□□□□ -1.09
Alx1Q8C8B0 Gm29383-201ENSMUST00000188284 480 ntBASIC8.26□□□□□ -1.09
Alx1Q8C8B0 Gm36932-201ENSMUST00000195226 929 ntBASIC8.26□□□□□ -1.09
Alx1Q8C8B0 Gm8182-201ENSMUST00000197863 769 ntBASIC8.26□□□□□ -1.09
Alx1Q8C8B0 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC8.26□□□□□ -1.09
Alx1Q8C8B0 Gm18907-201ENSMUST00000209719 932 ntBASIC8.26□□□□□ -1.09
Alx1Q8C8B0 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC8.26□□□□□ -1.09
Alx1Q8C8B0 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC8.26□□□□□ -1.09
Alx1Q8C8B0 AC163660.1-201ENSMUST00000223696 818 ntBASIC8.26□□□□□ -1.09
Alx1Q8C8B0 AC159188.3-201ENSMUST00000224199 880 ntBASIC8.26□□□□□ -1.09
Alx1Q8C8B0 AC115304.1-202ENSMUST00000226850 837 ntBASIC8.26□□□□□ -1.09
Alx1Q8C8B0 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Alx1Q8C8B0 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Alx1Q8C8B0 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Alx1Q8C8B0 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Alx1Q8C8B0 Gm6887-201ENSMUST00000080945 482 ntBASIC8.26□□□□□ -1.09
Alx1Q8C8B0 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC8.26□□□□□ -1.09
Alx1Q8C8B0 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC8.26□□□□□ -1.09
Alx1Q8C8B0 Sbf2-201ENSMUST00000033058 7154 ntAPPRIS P2 TSL 5 BASIC8.26□□□□□ -1.09
Alx1Q8C8B0 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Alx1Q8C8B0 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Alx1Q8C8B0 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Alx1Q8C8B0 Gm42568-201ENSMUST00000195639 1841 ntBASIC8.26□□□□□ -1.09
Alx1Q8C8B0 Gm4961-201ENSMUST00000197982 2249 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Alx1Q8C8B0 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Alx1Q8C8B0 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Alx1Q8C8B0 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Alx1Q8C8B0 CT030185.2-201ENSMUST00000222614 1310 ntBASIC8.26□□□□□ -1.09
Alx1Q8C8B0 Gm38009-201ENSMUST00000194884 3341 ntBASIC8.26□□□□□ -1.09
Alx1Q8C8B0 Gm43189-201ENSMUST00000196040 3069 ntBASIC8.26□□□□□ -1.09
Alx1Q8C8B0 Pld1-202ENSMUST00000120834 4849 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Alx1Q8C8B0 Fam19a1-201ENSMUST00000075080 2411 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Alx1Q8C8B0 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Alx1Q8C8B0 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Alx1Q8C8B0 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Alx1Q8C8B0 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Alx1Q8C8B0 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
Alx1Q8C8B0 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Alx1Q8C8B0 Plekhm3-201ENSMUST00000097713 8562 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Alx1Q8C8B0 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Alx1Q8C8B0 Gm24519-201ENSMUST00000104507 132 ntBASIC8.25□□□□□ -1.09
Alx1Q8C8B0 Gm14729-201ENSMUST00000118373 689 ntBASIC8.25□□□□□ -1.09
Alx1Q8C8B0 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC8.25□□□□□ -1.09
Alx1Q8C8B0 Trp53cor1-201ENSMUST00000133221 2956 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Alx1Q8C8B0 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC8.25□□□□□ -1.09
Alx1Q8C8B0 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC8.25□□□□□ -1.09
Alx1Q8C8B0 Gm22533-201ENSMUST00000158821 274 ntBASIC8.25□□□□□ -1.09
Alx1Q8C8B0 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC8.25□□□□□ -1.09
Alx1Q8C8B0 Gm8715-201ENSMUST00000162728 531 ntBASIC8.25□□□□□ -1.09
Alx1Q8C8B0 Gm15734-201ENSMUST00000163076 1040 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Alx1Q8C8B0 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC8.25□□□□□ -1.09
Alx1Q8C8B0 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Alx1Q8C8B0 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Alx1Q8C8B0 AC099934.1-201ENSMUST00000200493 79 ntBASIC8.25□□□□□ -1.09
Alx1Q8C8B0 Gm45739-201ENSMUST00000213094 388 ntBASIC8.25□□□□□ -1.09
Alx1Q8C8B0 AC154515.3-201ENSMUST00000225081 1159 ntBASIC8.25□□□□□ -1.09
Alx1Q8C8B0 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Alx1Q8C8B0 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Alx1Q8C8B0 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Alx1Q8C8B0 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC8.25□□□□□ -1.09
Alx1Q8C8B0 Gm24411-201ENSMUST00000083428 131 ntBASIC8.25□□□□□ -1.09
Alx1Q8C8B0 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Alx1Q8C8B0 Rdx-203ENSMUST00000163153 4131 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Alx1Q8C8B0 Inpp5d-208ENSMUST00000167032 4125 ntTSL 2 BASIC8.25□□□□□ -1.09
Alx1Q8C8B0 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Alx1Q8C8B0 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Alx1Q8C8B0 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Alx1Q8C8B0 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC8.25□□□□□ -1.09
Alx1Q8C8B0 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Alx1Q8C8B0 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Alx1Q8C8B0 Gm14762-201ENSMUST00000105109 1771 ntBASIC8.25□□□□□ -1.09
Alx1Q8C8B0 Dcn-202ENSMUST00000163448 1758 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Alx1Q8C8B0 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 93 ms