Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm12929-201ENSMUST00000122406 370 ntBASIC9.83□□□□□ -0.84
Usp40Q8BWR4 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC9.83□□□□□ -0.84
Usp40Q8BWR4 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Usp40Q8BWR4 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC9.83□□□□□ -0.84
Usp40Q8BWR4 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Usp40Q8BWR4 Gm10136-201ENSMUST00000183196 435 ntBASIC9.83□□□□□ -0.84
Usp40Q8BWR4 Gm7867-201ENSMUST00000189856 546 ntBASIC9.83□□□□□ -0.84
Usp40Q8BWR4 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC9.83□□□□□ -0.84
Usp40Q8BWR4 Gm37322-201ENSMUST00000193409 337 ntBASIC9.83□□□□□ -0.84
Usp40Q8BWR4 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC9.83□□□□□ -0.84
Usp40Q8BWR4 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Usp40Q8BWR4 Gm44548-201ENSMUST00000208929 192 ntBASIC9.83□□□□□ -0.84
Usp40Q8BWR4 Gm45782-201ENSMUST00000212670 366 ntBASIC9.83□□□□□ -0.84
Usp40Q8BWR4 Gm3678-201ENSMUST00000218888 492 ntBASIC9.83□□□□□ -0.84
Usp40Q8BWR4 AC161374.1-201ENSMUST00000224191 794 ntBASIC9.83□□□□□ -0.84
Usp40Q8BWR4 AC151730.1-201ENSMUST00000226106 448 ntBASIC9.83□□□□□ -0.84
Usp40Q8BWR4 FAM237A-201ENSMUST00000226288 1105 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Usp40Q8BWR4 AC154618.2-201ENSMUST00000228299 452 ntBASIC9.83□□□□□ -0.84
Usp40Q8BWR4 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Usp40Q8BWR4 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Usp40Q8BWR4 Pan2-203ENSMUST00000218315 4379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Usp40Q8BWR4 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Usp40Q8BWR4 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Usp40Q8BWR4 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Usp40Q8BWR4 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC9.83□□□□□ -0.84
Usp40Q8BWR4 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Usp40Q8BWR4 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC9.83□□□□□ -0.84
Usp40Q8BWR4 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC9.83□□□□□ -0.84
Usp40Q8BWR4 Slfn4-202ENSMUST00000167596 3703 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Usp40Q8BWR4 Unc79-201ENSMUST00000085079 7762 ntAPPRIS ALT2 TSL 2 BASIC9.83□□□□□ -0.84
Usp40Q8BWR4 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC9.83□□□□□ -0.84
Usp40Q8BWR4 Extl2-203ENSMUST00000106502 2840 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Usp40Q8BWR4 A730036I17Rik-201ENSMUST00000143346 3431 ntTSL 2 BASIC9.82□□□□□ -0.84
Usp40Q8BWR4 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Usp40Q8BWR4 Gm37510-201ENSMUST00000194151 4762 ntBASIC9.82□□□□□ -0.84
Usp40Q8BWR4 Parp11-201ENSMUST00000039680 3746 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Usp40Q8BWR4 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Usp40Q8BWR4 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Usp40Q8BWR4 Smarcal1-207ENSMUST00000152225 2994 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Usp40Q8BWR4 Zfp488-201ENSMUST00000166737 4301 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Usp40Q8BWR4 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Usp40Q8BWR4 Glce-201ENSMUST00000034785 4626 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Usp40Q8BWR4 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Usp40Q8BWR4 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC9.82□□□□□ -0.84
Usp40Q8BWR4 AC129308.1-201ENSMUST00000223800 2309 ntBASIC9.82□□□□□ -0.84
Usp40Q8BWR4 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Usp40Q8BWR4 Gm9144-201ENSMUST00000101625 1008 ntBASIC9.82□□□□□ -0.84
Usp40Q8BWR4 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC9.82□□□□□ -0.84
Usp40Q8BWR4 Gm12804-201ENSMUST00000121030 999 ntBASIC9.82□□□□□ -0.84
Usp40Q8BWR4 Gm5843-201ENSMUST00000121631 476 ntBASIC9.82□□□□□ -0.84
Usp40Q8BWR4 Gm14847-201ENSMUST00000121978 519 ntBASIC9.82□□□□□ -0.84
Usp40Q8BWR4 Gm22275-201ENSMUST00000122470 310 ntBASIC9.82□□□□□ -0.84
Usp40Q8BWR4 BC064078-201ENSMUST00000122939 570 ntBASIC9.82□□□□□ -0.84
Usp40Q8BWR4 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Usp40Q8BWR4 Gm9672-201ENSMUST00000166437 425 ntBASIC9.82□□□□□ -0.84
Usp40Q8BWR4 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Usp40Q8BWR4 Gm28958-201ENSMUST00000185864 703 ntBASIC9.82□□□□□ -0.84
Usp40Q8BWR4 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Usp40Q8BWR4 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC9.82□□□□□ -0.84
Usp40Q8BWR4 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC9.82□□□□□ -0.84
Usp40Q8BWR4 Zmym2-202ENSMUST00000223669 1281 ntBASIC9.82□□□□□ -0.84
Usp40Q8BWR4 Prl7a1-203ENSMUST00000224852 1283 ntBASIC9.82□□□□□ -0.84
Usp40Q8BWR4 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Usp40Q8BWR4 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Usp40Q8BWR4 Gm9874-202ENSMUST00000194957 1464 ntBASIC9.82□□□□□ -0.84
Usp40Q8BWR4 AC171003.1-201ENSMUST00000221667 1665 ntBASIC9.82□□□□□ -0.84
Usp40Q8BWR4 Amy1-202ENSMUST00000106540 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Usp40Q8BWR4 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Usp40Q8BWR4 Drp2-203ENSMUST00000113226 3499 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Usp40Q8BWR4 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Usp40Q8BWR4 AC156645.1-201ENSMUST00000223066 5194 ntBASIC9.82□□□□□ -0.84
Usp40Q8BWR4 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC9.82□□□□□ -0.84
Usp40Q8BWR4 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC9.82□□□□□ -0.84
Usp40Q8BWR4 AC166574.1-201ENSMUST00000226916 1309 ntBASIC9.82□□□□□ -0.84
Usp40Q8BWR4 Frmd4b-204ENSMUST00000113359 4311 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Usp40Q8BWR4 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Usp40Q8BWR4 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Usp40Q8BWR4 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usp40Q8BWR4 Ssh2-201ENSMUST00000037912 9178 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Usp40Q8BWR4 n-R5s72-201ENSMUST00000104518 119 ntBASIC9.81□□□□□ -0.84
Usp40Q8BWR4 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC9.81□□□□□ -0.84
Usp40Q8BWR4 Efcab5-201ENSMUST00000108400 4654 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Usp40Q8BWR4 Gm13313-201ENSMUST00000118938 1084 ntBASIC9.81□□□□□ -0.84
Usp40Q8BWR4 Gm5166-201ENSMUST00000121332 573 ntBASIC9.81□□□□□ -0.84
Usp40Q8BWR4 Gm12920-201ENSMUST00000121818 1186 ntBASIC9.81□□□□□ -0.84
Usp40Q8BWR4 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC9.81□□□□□ -0.84
Usp40Q8BWR4 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Usp40Q8BWR4 Gm8550-201ENSMUST00000161621 653 ntBASIC9.81□□□□□ -0.84
Usp40Q8BWR4 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Usp40Q8BWR4 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC9.81□□□□□ -0.84
Usp40Q8BWR4 Gm37383-201ENSMUST00000191750 745 ntBASIC9.81□□□□□ -0.84
Usp40Q8BWR4 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC9.81□□□□□ -0.84
Usp40Q8BWR4 Gm38217-201ENSMUST00000194358 910 ntBASIC9.81□□□□□ -0.84
Usp40Q8BWR4 Gm44342-201ENSMUST00000196874 129 ntBASIC9.81□□□□□ -0.84
Usp40Q8BWR4 Gm18430-201ENSMUST00000197534 682 ntBASIC9.81□□□□□ -0.84
Usp40Q8BWR4 Gm44383-201ENSMUST00000198940 129 ntBASIC9.81□□□□□ -0.84
Usp40Q8BWR4 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Usp40Q8BWR4 AC163621.1-201ENSMUST00000220695 379 ntBASIC9.81□□□□□ -0.84
Usp40Q8BWR4 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Usp40Q8BWR4 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 117.5 ms