Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Pcdhb11-201ENSMUST00000053073 4419 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Usp54Q8BL06 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Usp54Q8BL06 Anln-201ENSMUST00000040912 4605 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Usp54Q8BL06 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Usp54Q8BL06 Gm13301-201ENSMUST00000121728 2446 ntBASIC10.02□□□□□ -0.81
Usp54Q8BL06 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Usp54Q8BL06 Wipf3-206ENSMUST00000172046 4204 ntAPPRIS P4 TSL 5 BASIC10.02□□□□□ -0.81
Usp54Q8BL06 Gm10778-202ENSMUST00000189672 4735 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Usp54Q8BL06 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC10.02□□□□□ -0.81
Usp54Q8BL06 6030443J06Rik-203ENSMUST00000181764 4299 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Usp54Q8BL06 Mast2-202ENSMUST00000106484 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Usp54Q8BL06 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Usp54Q8BL06 Zfp882-201ENSMUST00000110002 3152 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Usp54Q8BL06 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Usp54Q8BL06 Sh2d2a-201ENSMUST00000029709 4484 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Usp54Q8BL06 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Usp54Q8BL06 Gm11271-201ENSMUST00000116054 440 ntBASIC10.01□□□□□ -0.81
Usp54Q8BL06 Gm8250-201ENSMUST00000117398 774 ntBASIC10.01□□□□□ -0.81
Usp54Q8BL06 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Usp54Q8BL06 Gm3810-201ENSMUST00000122413 476 ntBASIC10.01□□□□□ -0.81
Usp54Q8BL06 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC10.01□□□□□ -0.81
Usp54Q8BL06 Gm9167-201ENSMUST00000182469 962 ntBASIC10.01□□□□□ -0.81
Usp54Q8BL06 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC10.01□□□□□ -0.81
Usp54Q8BL06 Gm20223-201ENSMUST00000199932 805 ntBASIC10.01□□□□□ -0.81
Usp54Q8BL06 AC114572.1-201ENSMUST00000227262 300 ntBASIC10.01□□□□□ -0.81
Usp54Q8BL06 AC132833.4-201ENSMUST00000228313 203 ntBASIC10.01□□□□□ -0.81
Usp54Q8BL06 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC10.01□□□□□ -0.81
Usp54Q8BL06 Gm45182-201ENSMUST00000207579 2404 ntBASIC10.01□□□□□ -0.81
Usp54Q8BL06 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Usp54Q8BL06 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Usp54Q8BL06 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Usp54Q8BL06 A330015K06Rik-201ENSMUST00000195489 4286 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Usp54Q8BL06 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Usp54Q8BL06 Gm10773-201ENSMUST00000218071 3935 ntBASIC10.01□□□□□ -0.81
Usp54Q8BL06 Tmed5-201ENSMUST00000002837 3800 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Usp54Q8BL06 Spag9-205ENSMUST00000103168 6840 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Usp54Q8BL06 Gm4894-202ENSMUST00000216428 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Usp54Q8BL06 Abca4-201ENSMUST00000013995 7263 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Usp54Q8BL06 AC134577.3-201ENSMUST00000226490 3000 ntBASIC10.01□□□□□ -0.81
Usp54Q8BL06 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Usp54Q8BL06 Gm6493-201ENSMUST00000159889 1786 ntBASIC10.01□□□□□ -0.81
Usp54Q8BL06 Myo15-202ENSMUST00000081823 7953 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Usp54Q8BL06 Gm43410-201ENSMUST00000197510 2234 ntBASIC10.01□□□□□ -0.81
Usp54Q8BL06 Gm11902-201ENSMUST00000118849 270 ntBASIC10.01□□□□□ -0.81
Usp54Q8BL06 Gm13578-201ENSMUST00000120849 590 ntBASIC10.01□□□□□ -0.81
Usp54Q8BL06 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Usp54Q8BL06 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC10.01□□□□□ -0.81
Usp54Q8BL06 Gm2602-201ENSMUST00000202112 571 ntBASIC10.01□□□□□ -0.81
Usp54Q8BL06 Gm44911-201ENSMUST00000208436 1062 ntBASIC10.01□□□□□ -0.81
Usp54Q8BL06 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC10.01□□□□□ -0.81
Usp54Q8BL06 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC10.01□□□□□ -0.81
Usp54Q8BL06 AC104906.1-201ENSMUST00000218122 913 ntBASIC10.01□□□□□ -0.81
Usp54Q8BL06 Gm46203-201ENSMUST00000218130 478 ntBASIC10.01□□□□□ -0.81
Usp54Q8BL06 CT009711.4-201ENSMUST00000225685 198 ntBASIC10.01□□□□□ -0.81
Usp54Q8BL06 Vmn1r41-202ENSMUST00000226337 888 ntBASIC10.01□□□□□ -0.81
Usp54Q8BL06 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC10.01□□□□□ -0.81
Usp54Q8BL06 AC156790.1-201ENSMUST00000226572 559 ntBASIC10.01□□□□□ -0.81
Usp54Q8BL06 AC154806.1-203ENSMUST00000227370 1032 ntBASIC10.01□□□□□ -0.81
Usp54Q8BL06 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Usp54Q8BL06 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC10.01□□□□□ -0.81
Usp54Q8BL06 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Usp54Q8BL06 Dusp3-201ENSMUST00000003612 4212 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Usp54Q8BL06 Tgm3-201ENSMUST00000110299 4135 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Usp54Q8BL06 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC10□□□□□ -0.81
Usp54Q8BL06 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC10□□□□□ -0.81
Usp54Q8BL06 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Usp54Q8BL06 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Usp54Q8BL06 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Usp54Q8BL06 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Usp54Q8BL06 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Usp54Q8BL06 Ttc26-205ENSMUST00000162554 4195 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Usp54Q8BL06 Trim66-203ENSMUST00000106741 4417 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Usp54Q8BL06 Xlr5a-203ENSMUST00000114521 1474 ntTSL 5 BASIC10□□□□□ -0.81
Usp54Q8BL06 AC154612.1-202ENSMUST00000224806 1725 ntBASIC10□□□□□ -0.81
Usp54Q8BL06 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC10□□□□□ -0.81
Usp54Q8BL06 Gm13702-201ENSMUST00000118542 825 ntBASIC10□□□□□ -0.81
Usp54Q8BL06 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC10□□□□□ -0.81
Usp54Q8BL06 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC10□□□□□ -0.81
Usp54Q8BL06 Gm36935-201ENSMUST00000192526 292 ntBASIC10□□□□□ -0.81
Usp54Q8BL06 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC10□□□□□ -0.81
Usp54Q8BL06 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC10□□□□□ -0.81
Usp54Q8BL06 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC10□□□□□ -0.81
Usp54Q8BL06 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC10□□□□□ -0.81
Usp54Q8BL06 CT009738.1-201ENSMUST00000219031 809 ntBASIC10□□□□□ -0.81
Usp54Q8BL06 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Usp54Q8BL06 Gm6990-201ENSMUST00000086830 348 ntBASIC10□□□□□ -0.81
Usp54Q8BL06 Scn2b-202ENSMUST00000170998 4656 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Usp54Q8BL06 Arhgef9-207ENSMUST00000113885 4578 ntTSL 5 BASIC10□□□□□ -0.81
Usp54Q8BL06 Smpd4-203ENSMUST00000090159 4565 ntTSL 1 (best) BASIC10□□□□□ -0.81
Usp54Q8BL06 Smarcal1-207ENSMUST00000152225 2994 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Usp54Q8BL06 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Usp54Q8BL06 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Usp54Q8BL06 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Usp54Q8BL06 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Usp54Q8BL06 Gm26541-201ENSMUST00000181866 3973 ntTSL 5 BASIC9.99□□□□□ -0.81
Usp54Q8BL06 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC9.99□□□□□ -0.81
Usp54Q8BL06 Gm20045-201ENSMUST00000192658 5577 ntBASIC9.99□□□□□ -0.81
Usp54Q8BL06 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Usp54Q8BL06 Usp45-201ENSMUST00000040429 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Usp54Q8BL06 Eif2ak4-202ENSMUST00000102527 4906 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms