Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 AC122356.1-202ENSMUST00000227328 2758 ntBASIC8.29□□□□□ -1.08
Nup98Q6PFD9 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Nup98Q6PFD9 Rassf6-201ENSMUST00000031317 1958 ntAPPRIS P3 TSL 5 BASIC8.29□□□□□ -1.08
Nup98Q6PFD9 Gm37663-201ENSMUST00000191887 2299 ntBASIC8.29□□□□□ -1.08
Nup98Q6PFD9 Tbcel-203ENSMUST00000125995 4849 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Nup98Q6PFD9 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Nup98Q6PFD9 AC115746.1-201ENSMUST00000228949 3617 ntBASIC8.29□□□□□ -1.08
Nup98Q6PFD9 Gm12451-201ENSMUST00000121636 633 ntBASIC8.29□□□□□ -1.08
Nup98Q6PFD9 Gm15164-201ENSMUST00000122203 271 ntBASIC8.29□□□□□ -1.08
Nup98Q6PFD9 Gm9285-201ENSMUST00000177691 697 ntBASIC8.29□□□□□ -1.08
Nup98Q6PFD9 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Nup98Q6PFD9 Gm8168-201ENSMUST00000209631 948 ntBASIC8.29□□□□□ -1.08
Nup98Q6PFD9 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Nup98Q6PFD9 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Nup98Q6PFD9 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Nup98Q6PFD9 Ep400-203ENSMUST00000112435 10420 ntTSL 5 BASIC8.29□□□□□ -1.08
Nup98Q6PFD9 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Nup98Q6PFD9 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Nup98Q6PFD9 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Nup98Q6PFD9 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Nup98Q6PFD9 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Nup98Q6PFD9 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Nup98Q6PFD9 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Nup98Q6PFD9 Prps2-201ENSMUST00000026839 3699 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Nup98Q6PFD9 Utrn-206ENSMUST00000219003 5751 ntTSL 5 BASIC8.28□□□□□ -1.08
Nup98Q6PFD9 Tmc3-201ENSMUST00000039317 6221 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Nup98Q6PFD9 Rai14-207ENSMUST00000227506 4732 ntAPPRIS ALT2 BASIC8.28□□□□□ -1.08
Nup98Q6PFD9 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Nup98Q6PFD9 Hepacam2-201ENSMUST00000049985 2328 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Nup98Q6PFD9 Gm37595-201ENSMUST00000192668 1742 ntBASIC8.28□□□□□ -1.08
Nup98Q6PFD9 Fnbp1-207ENSMUST00000113559 4378 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Nup98Q6PFD9 Ubn2-205ENSMUST00000160583 14644 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Nup98Q6PFD9 4931406B18Rik-208ENSMUST00000191516 2566 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Nup98Q6PFD9 Smarca1-201ENSMUST00000077569 4024 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Nup98Q6PFD9 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Nup98Q6PFD9 Ergic2-208ENSMUST00000136008 4174 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Nup98Q6PFD9 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Nup98Q6PFD9 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Nup98Q6PFD9 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC8.28□□□□□ -1.08
Nup98Q6PFD9 Gm14864-201ENSMUST00000116164 1087 ntBASIC8.28□□□□□ -1.08
Nup98Q6PFD9 Gm11796-201ENSMUST00000120208 972 ntBASIC8.28□□□□□ -1.08
Nup98Q6PFD9 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC8.28□□□□□ -1.08
Nup98Q6PFD9 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Nup98Q6PFD9 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
Nup98Q6PFD9 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC8.28□□□□□ -1.08
Nup98Q6PFD9 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC8.28□□□□□ -1.08
Nup98Q6PFD9 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC8.28□□□□□ -1.08
Nup98Q6PFD9 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC8.28□□□□□ -1.08
Nup98Q6PFD9 AC117240.1-201ENSMUST00000199436 61 ntBASIC8.28□□□□□ -1.08
Nup98Q6PFD9 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Nup98Q6PFD9 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Nup98Q6PFD9 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Nup98Q6PFD9 Sh2d2a-201ENSMUST00000029709 4484 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Nup98Q6PFD9 Gm13083-201ENSMUST00000105773 2464 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Nup98Q6PFD9 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Nup98Q6PFD9 Pdgfra-201ENSMUST00000000476 6549 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Nup98Q6PFD9 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Nup98Q6PFD9 Inpp5d-211ENSMUST00000170300 3942 ntTSL 2 BASIC8.28□□□□□ -1.08
Nup98Q6PFD9 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Nup98Q6PFD9 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Nup98Q6PFD9 Fnbp1-201ENSMUST00000073879 8469 ntTSL 5 BASIC8.28□□□□□ -1.08
Nup98Q6PFD9 AC122828.2-201ENSMUST00000222511 2880 ntBASIC8.28□□□□□ -1.08
Nup98Q6PFD9 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.08
Nup98Q6PFD9 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.08
Nup98Q6PFD9 Adgrl2-213ENSMUST00000199059 4637 ntTSL 5 BASIC8.27□□□□□ -1.08
Nup98Q6PFD9 Gm15413-201ENSMUST00000155101 1935 ntTSL 2 BASIC8.27□□□□□ -1.08
Nup98Q6PFD9 Ice1-201ENSMUST00000043493 7667 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Nup98Q6PFD9 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC8.27□□□□□ -1.09
Nup98Q6PFD9 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Nup98Q6PFD9 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC8.27□□□□□ -1.09
Nup98Q6PFD9 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Nup98Q6PFD9 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Nup98Q6PFD9 Snord88a-201ENSMUST00000116723 90 ntBASIC8.27□□□□□ -1.09
Nup98Q6PFD9 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Nup98Q6PFD9 Gm13983-201ENSMUST00000118018 865 ntBASIC8.27□□□□□ -1.09
Nup98Q6PFD9 Gm15000-201ENSMUST00000118275 1243 ntBASIC8.27□□□□□ -1.09
Nup98Q6PFD9 Gm12101-201ENSMUST00000121590 390 ntBASIC8.27□□□□□ -1.09
Nup98Q6PFD9 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Nup98Q6PFD9 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Nup98Q6PFD9 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Nup98Q6PFD9 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Nup98Q6PFD9 Gm21301-201ENSMUST00000189476 699 ntBASIC8.27□□□□□ -1.09
Nup98Q6PFD9 Ighv8-3-201ENSMUST00000194985 295 ntBASIC8.27□□□□□ -1.09
Nup98Q6PFD9 Gm5154-201ENSMUST00000203971 399 ntBASIC8.27□□□□□ -1.09
Nup98Q6PFD9 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC8.27□□□□□ -1.09
Nup98Q6PFD9 Gm26541-201ENSMUST00000181866 3973 ntTSL 5 BASIC8.27□□□□□ -1.09
Nup98Q6PFD9 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Nup98Q6PFD9 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Nup98Q6PFD9 AC129308.2-203ENSMUST00000224109 2385 ntBASIC8.27□□□□□ -1.09
Nup98Q6PFD9 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC8.27□□□□□ -1.09
Nup98Q6PFD9 Thada-201ENSMUST00000047524 7884 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Nup98Q6PFD9 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
Nup98Q6PFD9 AC154141.1-201ENSMUST00000208403 4136 ntBASIC8.27□□□□□ -1.09
Nup98Q6PFD9 Sema5a-201ENSMUST00000067458 10809 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Nup98Q6PFD9 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Nup98Q6PFD9 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
Nup98Q6PFD9 Cep57l1-209ENSMUST00000189770 2232 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
Nup98Q6PFD9 Erc2-201ENSMUST00000090302 6083 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Nup98Q6PFD9 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC8.27□□□□□ -1.09
Nup98Q6PFD9 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms