Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 AC192333.5-201ENSMUST00000224620 2350 ntBASIC6.94□□□□□ -1.3
ClpbQ60649 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC6.94□□□□□ -1.3
ClpbQ60649 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
ClpbQ60649 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
ClpbQ60649 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
ClpbQ60649 Gm7945-201ENSMUST00000164948 1428 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
ClpbQ60649 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
ClpbQ60649 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
ClpbQ60649 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
ClpbQ60649 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC6.93□□□□□ -1.3
ClpbQ60649 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
ClpbQ60649 Gm10693-201ENSMUST00000144146 2037 ntBASIC6.93□□□□□ -1.3
ClpbQ60649 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
ClpbQ60649 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
ClpbQ60649 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
ClpbQ60649 AC122426.2-201ENSMUST00000216522 2947 ntBASIC6.93□□□□□ -1.3
ClpbQ60649 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC6.93□□□□□ -1.3
ClpbQ60649 Gm22438-201ENSMUST00000104049 132 ntBASIC6.93□□□□□ -1.3
ClpbQ60649 Tceal7-201ENSMUST00000113116 971 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
ClpbQ60649 Serpina3h-202ENSMUST00000116393 1226 ntBASIC6.93□□□□□ -1.3
ClpbQ60649 Gm12331-201ENSMUST00000119927 622 ntBASIC6.93□□□□□ -1.3
ClpbQ60649 Gm5255-201ENSMUST00000120125 642 ntBASIC6.93□□□□□ -1.3
ClpbQ60649 Gm11945-201ENSMUST00000120551 476 ntBASIC6.93□□□□□ -1.3
ClpbQ60649 Gm15006-201ENSMUST00000121419 1122 ntBASIC6.93□□□□□ -1.3
ClpbQ60649 Rsf1os1-201ENSMUST00000126902 324 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
ClpbQ60649 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
ClpbQ60649 Btf3-205ENSMUST00000152704 888 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
ClpbQ60649 Gm6428-201ENSMUST00000161062 345 ntBASIC6.93□□□□□ -1.3
ClpbQ60649 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC6.93□□□□□ -1.3
ClpbQ60649 Gm6489-201ENSMUST00000178167 696 ntBASIC6.93□□□□□ -1.3
ClpbQ60649 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
ClpbQ60649 Gm37907-201ENSMUST00000195644 846 ntTSL 5 BASIC6.93□□□□□ -1.3
ClpbQ60649 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC6.93□□□□□ -1.3
ClpbQ60649 Gm45198-201ENSMUST00000206796 591 ntBASIC6.93□□□□□ -1.3
ClpbQ60649 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
ClpbQ60649 Gm19092-201ENSMUST00000209036 969 ntBASIC6.93□□□□□ -1.3
ClpbQ60649 Gm45446-201ENSMUST00000209348 216 ntBASIC6.93□□□□□ -1.3
ClpbQ60649 Gm45463-202ENSMUST00000210735 1188 ntTSL 5 BASIC6.93□□□□□ -1.3
ClpbQ60649 Gm7368-201ENSMUST00000213307 367 ntBASIC6.93□□□□□ -1.3
ClpbQ60649 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC6.93□□□□□ -1.3
ClpbQ60649 AC118476.2-201ENSMUST00000215206 757 ntTSL 3 BASIC6.93□□□□□ -1.3
ClpbQ60649 Gm6667-201ENSMUST00000217169 564 ntBASIC6.93□□□□□ -1.3
ClpbQ60649 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC6.93□□□□□ -1.3
ClpbQ60649 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
ClpbQ60649 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC6.93□□□□□ -1.3
ClpbQ60649 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
ClpbQ60649 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC6.93□□□□□ -1.3
ClpbQ60649 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
ClpbQ60649 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
ClpbQ60649 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC6.93□□□□□ -1.3
ClpbQ60649 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
ClpbQ60649 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
ClpbQ60649 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
ClpbQ60649 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
ClpbQ60649 Gm30165-201ENSMUST00000218769 1961 ntTSL 5 BASIC6.93□□□□□ -1.3
ClpbQ60649 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC6.93□□□□□ -1.3
ClpbQ60649 Gm11853-201ENSMUST00000119687 1384 ntBASIC6.93□□□□□ -1.3
ClpbQ60649 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
ClpbQ60649 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
ClpbQ60649 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
ClpbQ60649 Gm18726-201ENSMUST00000218175 2010 ntBASIC6.93□□□□□ -1.3
ClpbQ60649 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ClpbQ60649 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
ClpbQ60649 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
ClpbQ60649 Omg-201ENSMUST00000164465 2228 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ClpbQ60649 CT025619.3-201ENSMUST00000216299 3267 ntBASIC6.92□□□□□ -1.3
ClpbQ60649 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ClpbQ60649 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ClpbQ60649 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ClpbQ60649 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ClpbQ60649 Olfr1239-202ENSMUST00000216762 1643 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
ClpbQ60649 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ClpbQ60649 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ClpbQ60649 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC6.92□□□□□ -1.3
ClpbQ60649 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
ClpbQ60649 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ClpbQ60649 Gm5752-201ENSMUST00000117771 594 ntBASIC6.92□□□□□ -1.3
ClpbQ60649 Gm15778-201ENSMUST00000118469 608 ntBASIC6.92□□□□□ -1.3
ClpbQ60649 Gm14485-201ENSMUST00000119489 493 ntBASIC6.92□□□□□ -1.3
ClpbQ60649 Gm25843-201ENSMUST00000122582 314 ntBASIC6.92□□□□□ -1.3
ClpbQ60649 Gm22025-201ENSMUST00000122734 302 ntBASIC6.92□□□□□ -1.3
ClpbQ60649 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC6.92□□□□□ -1.3
ClpbQ60649 Gm17032-201ENSMUST00000164367 338 ntTSL 3 BASIC6.92□□□□□ -1.3
ClpbQ60649 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
ClpbQ60649 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
ClpbQ60649 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
ClpbQ60649 B230104I21Rik-201ENSMUST00000181143 876 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ClpbQ60649 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ClpbQ60649 Gm28918-201ENSMUST00000188822 699 ntBASIC6.92□□□□□ -1.3
ClpbQ60649 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC6.92□□□□□ -1.3
ClpbQ60649 Gm17965-201ENSMUST00000193904 517 ntBASIC6.92□□□□□ -1.3
ClpbQ60649 Gm35108-201ENSMUST00000194321 699 ntBASIC6.92□□□□□ -1.3
ClpbQ60649 Gm37871-201ENSMUST00000194973 688 ntBASIC6.92□□□□□ -1.3
ClpbQ60649 Gm36932-201ENSMUST00000195226 929 ntBASIC6.92□□□□□ -1.3
ClpbQ60649 Gm33191-201ENSMUST00000195604 699 ntBASIC6.92□□□□□ -1.3
ClpbQ60649 Gm19088-201ENSMUST00000198800 566 ntBASIC6.92□□□□□ -1.3
ClpbQ60649 Gm42804-201ENSMUST00000199701 178 ntBASIC6.92□□□□□ -1.3
ClpbQ60649 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC6.92□□□□□ -1.3
ClpbQ60649 Gm44694-201ENSMUST00000205317 1298 ntBASIC6.92□□□□□ -1.3
ClpbQ60649 Gm44931-201ENSMUST00000206056 545 ntBASIC6.92□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms