Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm27299-201ENSMUST00000184593 103 ntBASIC8.75□□□□□ -1.01
Shank3Q4ACU6 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Shank3Q4ACU6 Gm5260-201ENSMUST00000186157 949 ntBASIC8.75□□□□□ -1.01
Shank3Q4ACU6 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC8.75□□□□□ -1.01
Shank3Q4ACU6 Gm37135-201ENSMUST00000192652 534 ntBASIC8.75□□□□□ -1.01
Shank3Q4ACU6 Gm43089-201ENSMUST00000199162 275 ntBASIC8.75□□□□□ -1.01
Shank3Q4ACU6 Gm43725-201ENSMUST00000200122 369 ntBASIC8.75□□□□□ -1.01
Shank3Q4ACU6 AC154219.1-201ENSMUST00000220764 1262 ntBASIC8.75□□□□□ -1.01
Shank3Q4ACU6 AC132260.1-201ENSMUST00000225499 734 ntBASIC8.75□□□□□ -1.01
Shank3Q4ACU6 AC154795.1-201ENSMUST00000225611 364 ntBASIC8.75□□□□□ -1.01
Shank3Q4ACU6 AC137902.1-201ENSMUST00000228184 102 ntBASIC8.75□□□□□ -1.01
Shank3Q4ACU6 Synpo2-202ENSMUST00000106426 7063 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Shank3Q4ACU6 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC8.75□□□□□ -1.01
Shank3Q4ACU6 Brd8-202ENSMUST00000097626 3005 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Shank3Q4ACU6 Gm37549-201ENSMUST00000194096 4065 ntBASIC8.75□□□□□ -1.01
Shank3Q4ACU6 Gm5512-202ENSMUST00000220222 1522 ntBASIC8.75□□□□□ -1.01
Shank3Q4ACU6 Gm805-201ENSMUST00000181667 3160 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Shank3Q4ACU6 Csf3r-201ENSMUST00000030673 3160 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Shank3Q4ACU6 Pard3b-203ENSMUST00000094906 7676 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
Shank3Q4ACU6 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Shank3Q4ACU6 Gm5113-201ENSMUST00000085668 2955 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Shank3Q4ACU6 Ccdc150-201ENSMUST00000027128 3807 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Shank3Q4ACU6 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Shank3Q4ACU6 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Shank3Q4ACU6 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Shank3Q4ACU6 Nup210l-202ENSMUST00000200410 5710 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
Shank3Q4ACU6 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Shank3Q4ACU6 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Shank3Q4ACU6 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Shank3Q4ACU6 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
Shank3Q4ACU6 Mapk10-202ENSMUST00000112846 2617 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Shank3Q4ACU6 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC8.74□□□□□ -1.01
Shank3Q4ACU6 Gm6977-201ENSMUST00000121568 512 ntBASIC8.74□□□□□ -1.01
Shank3Q4ACU6 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Shank3Q4ACU6 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Shank3Q4ACU6 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Shank3Q4ACU6 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Shank3Q4ACU6 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC8.74□□□□□ -1.01
Shank3Q4ACU6 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC8.74□□□□□ -1.01
Shank3Q4ACU6 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC8.74□□□□□ -1.01
Shank3Q4ACU6 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC8.74□□□□□ -1.01
Shank3Q4ACU6 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC8.74□□□□□ -1.01
Shank3Q4ACU6 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC8.74□□□□□ -1.01
Shank3Q4ACU6 Gm44823-201ENSMUST00000204775 1107 ntBASIC8.74□□□□□ -1.01
Shank3Q4ACU6 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC8.74□□□□□ -1.01
Shank3Q4ACU6 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC8.74□□□□□ -1.01
Shank3Q4ACU6 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC8.74□□□□□ -1.01
Shank3Q4ACU6 AC165292.1-201ENSMUST00000215218 620 ntBASIC8.74□□□□□ -1.01
Shank3Q4ACU6 Vmn1r41-205ENSMUST00000227630 827 ntBASIC8.74□□□□□ -1.01
Shank3Q4ACU6 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC8.74□□□□□ -1.01
Shank3Q4ACU6 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Shank3Q4ACU6 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Shank3Q4ACU6 Grb10-203ENSMUST00000109654 4755 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Shank3Q4ACU6 Efna5-201ENSMUST00000076840 4032 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Shank3Q4ACU6 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Shank3Q4ACU6 AC159193.3-201ENSMUST00000221902 2622 ntBASIC8.74□□□□□ -1.01
Shank3Q4ACU6 AC123832.1-201ENSMUST00000214120 2371 ntBASIC8.74□□□□□ -1.01
Shank3Q4ACU6 Htr4-201ENSMUST00000027560 4657 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Shank3Q4ACU6 Gpr156-201ENSMUST00000061274 4581 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Shank3Q4ACU6 Gm38244-201ENSMUST00000191737 2586 ntBASIC8.74□□□□□ -1.01
Shank3Q4ACU6 Abcc3-206ENSMUST00000178136 5005 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Shank3Q4ACU6 Ank1-205ENSMUST00000117296 6794 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Shank3Q4ACU6 Ggta1-204ENSMUST00000113001 3340 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Shank3Q4ACU6 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC8.74□□□□□ -1.01
Shank3Q4ACU6 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Shank3Q4ACU6 AC153143.2-201ENSMUST00000220999 1804 ntBASIC8.74□□□□□ -1.01
Shank3Q4ACU6 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Shank3Q4ACU6 Snora35-201ENSMUST00000104579 128 ntBASIC8.74□□□□□ -1.01
Shank3Q4ACU6 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Shank3Q4ACU6 Gm11581-201ENSMUST00000122024 763 ntBASIC8.74□□□□□ -1.01
Shank3Q4ACU6 Gm4152-201ENSMUST00000172675 259 ntBASIC8.74□□□□□ -1.01
Shank3Q4ACU6 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Shank3Q4ACU6 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC8.74□□□□□ -1.01
Shank3Q4ACU6 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Shank3Q4ACU6 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Shank3Q4ACU6 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC8.74□□□□□ -1.01
Shank3Q4ACU6 Olfr517-202ENSMUST00000216500 2139 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Shank3Q4ACU6 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC8.74□□□□□ -1.01
Shank3Q4ACU6 Gm2139-201ENSMUST00000222569 1075 ntBASIC8.74□□□□□ -1.01
Shank3Q4ACU6 AC174797.2-203ENSMUST00000224017 716 ntBASIC8.74□□□□□ -1.01
Shank3Q4ACU6 AC161252.1-201ENSMUST00000225536 467 ntBASIC8.74□□□□□ -1.01
Shank3Q4ACU6 AC132833.4-201ENSMUST00000228313 203 ntBASIC8.74□□□□□ -1.01
Shank3Q4ACU6 Map4k4-215ENSMUST00000195259 3719 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Shank3Q4ACU6 2610203C22Rik-204ENSMUST00000148585 3475 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Shank3Q4ACU6 Rpgrip1-201ENSMUST00000111600 4565 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Shank3Q4ACU6 AL589871.1-201ENSMUST00000221299 3561 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Shank3Q4ACU6 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Shank3Q4ACU6 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Shank3Q4ACU6 Erc1-203ENSMUST00000183703 8760 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Shank3Q4ACU6 Gm13301-201ENSMUST00000121728 2446 ntBASIC8.73□□□□□ -1.01
Shank3Q4ACU6 Myo18a-201ENSMUST00000000645 7307 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
Shank3Q4ACU6 Myo18a-203ENSMUST00000092887 7304 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
Shank3Q4ACU6 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Shank3Q4ACU6 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Shank3Q4ACU6 Adcy7-201ENSMUST00000098521 5937 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Shank3Q4ACU6 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Shank3Q4ACU6 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Shank3Q4ACU6 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC8.73□□□□□ -1.01
Shank3Q4ACU6 AC134577.3-201ENSMUST00000226490 3000 ntBASIC8.73□□□□□ -1.01
Shank3Q4ACU6 Gm7700-201ENSMUST00000120273 970 ntBASIC8.73□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms