Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Gm17184-201ENSMUST00000111864 462 ntBASIC8.1□□□□□ -1.11
Ctdnep1Q3TP92 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ctdnep1Q3TP92 Gm14864-201ENSMUST00000116164 1087 ntBASIC8.1□□□□□ -1.11
Ctdnep1Q3TP92 Gm13486-201ENSMUST00000119910 282 ntBASIC8.1□□□□□ -1.11
Ctdnep1Q3TP92 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC8.1□□□□□ -1.11
Ctdnep1Q3TP92 Gm23891-201ENSMUST00000158114 138 ntBASIC8.1□□□□□ -1.11
Ctdnep1Q3TP92 Nrbf2-202ENSMUST00000159002 583 ntTSL 3 BASIC8.1□□□□□ -1.11
Ctdnep1Q3TP92 Gm7420-201ENSMUST00000162836 842 ntBASIC8.1□□□□□ -1.11
Ctdnep1Q3TP92 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Ctdnep1Q3TP92 Gm23639-201ENSMUST00000175078 132 ntBASIC8.1□□□□□ -1.11
Ctdnep1Q3TP92 Gm26570-201ENSMUST00000180672 342 ntBASIC8.1□□□□□ -1.11
Ctdnep1Q3TP92 6720483E21Rik-201ENSMUST00000181654 1120 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Ctdnep1Q3TP92 Gm17786-201ENSMUST00000182000 427 ntBASIC8.1□□□□□ -1.11
Ctdnep1Q3TP92 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC8.1□□□□□ -1.11
Ctdnep1Q3TP92 Gm5575-201ENSMUST00000190879 398 ntBASIC8.1□□□□□ -1.11
Ctdnep1Q3TP92 Gm3511-201ENSMUST00000199823 204 ntBASIC8.1□□□□□ -1.11
Ctdnep1Q3TP92 Gm43040-201ENSMUST00000202399 558 ntBASIC8.1□□□□□ -1.11
Ctdnep1Q3TP92 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC8.1□□□□□ -1.11
Ctdnep1Q3TP92 Gm33248-201ENSMUST00000205836 617 ntTSL 3 BASIC8.1□□□□□ -1.11
Ctdnep1Q3TP92 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC8.1□□□□□ -1.11
Ctdnep1Q3TP92 Gm45042-201ENSMUST00000207377 211 ntBASIC8.1□□□□□ -1.11
Ctdnep1Q3TP92 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC8.1□□□□□ -1.11
Ctdnep1Q3TP92 Gm9604-201ENSMUST00000211175 433 ntBASIC8.1□□□□□ -1.11
Ctdnep1Q3TP92 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Ctdnep1Q3TP92 Gm4796-201ENSMUST00000219802 624 ntBASIC8.1□□□□□ -1.11
Ctdnep1Q3TP92 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Ctdnep1Q3TP92 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Ctdnep1Q3TP92 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ctdnep1Q3TP92 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC8.1□□□□□ -1.11
Ctdnep1Q3TP92 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
Ctdnep1Q3TP92 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ctdnep1Q3TP92 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Ctdnep1Q3TP92 Prdx6b-201ENSMUST00000057072 2885 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Ctdnep1Q3TP92 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ctdnep1Q3TP92 Zzz3-203ENSMUST00000106101 7539 ntAPPRIS P3 TSL 5 BASIC8.1□□□□□ -1.11
Ctdnep1Q3TP92 Gm30165-201ENSMUST00000218769 1961 ntTSL 5 BASIC8.1□□□□□ -1.11
Ctdnep1Q3TP92 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC8.1□□□□□ -1.11
Ctdnep1Q3TP92 Gm44289-201ENSMUST00000204144 1390 ntBASIC8.1□□□□□ -1.11
Ctdnep1Q3TP92 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ctdnep1Q3TP92 Gm37525-201ENSMUST00000193499 2871 ntBASIC8.09□□□□□ -1.11
Ctdnep1Q3TP92 AC122769.1-201ENSMUST00000226930 1714 ntBASIC8.09□□□□□ -1.11
Ctdnep1Q3TP92 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Ctdnep1Q3TP92 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Ctdnep1Q3TP92 AC107452.3-201ENSMUST00000228807 1308 ntBASIC8.09□□□□□ -1.11
Ctdnep1Q3TP92 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Ctdnep1Q3TP92 Map1a-201ENSMUST00000094639 11825 ntAPPRIS P3 TSL 5 BASIC8.09□□□□□ -1.11
Ctdnep1Q3TP92 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ctdnep1Q3TP92 Gm37090-201ENSMUST00000195694 4105 ntBASIC8.09□□□□□ -1.11
Ctdnep1Q3TP92 Gm19801-201ENSMUST00000218231 1882 ntBASIC8.09□□□□□ -1.11
Ctdnep1Q3TP92 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ctdnep1Q3TP92 AC156645.1-201ENSMUST00000223066 5194 ntBASIC8.09□□□□□ -1.11
Ctdnep1Q3TP92 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ctdnep1Q3TP92 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ctdnep1Q3TP92 Gm25757-201ENSMUST00000103986 123 ntBASIC8.09□□□□□ -1.11
Ctdnep1Q3TP92 Gm13871-201ENSMUST00000107318 936 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Ctdnep1Q3TP92 Gm11757-201ENSMUST00000107320 936 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Ctdnep1Q3TP92 Gm11758-201ENSMUST00000107326 936 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Ctdnep1Q3TP92 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
Ctdnep1Q3TP92 Gm13930-201ENSMUST00000118569 368 ntBASIC8.09□□□□□ -1.11
Ctdnep1Q3TP92 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Ctdnep1Q3TP92 Gm23392-201ENSMUST00000157580 113 ntBASIC8.09□□□□□ -1.11
Ctdnep1Q3TP92 Gm5300-201ENSMUST00000182201 1003 ntBASIC8.09□□□□□ -1.11
Ctdnep1Q3TP92 Gm5787-201ENSMUST00000183049 1038 ntBASIC8.09□□□□□ -1.11
Ctdnep1Q3TP92 Gm29999-202ENSMUST00000193554 671 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Ctdnep1Q3TP92 Gm26413-201ENSMUST00000196783 126 ntBASIC8.09□□□□□ -1.11
Ctdnep1Q3TP92 Ighv8-15-201ENSMUST00000197770 294 ntBASIC8.09□□□□□ -1.11
Ctdnep1Q3TP92 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC8.09□□□□□ -1.11
Ctdnep1Q3TP92 Gm44979-201ENSMUST00000206218 287 ntBASIC8.09□□□□□ -1.11
Ctdnep1Q3TP92 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC8.09□□□□□ -1.11
Ctdnep1Q3TP92 Gm7986-201ENSMUST00000221336 551 ntBASIC8.09□□□□□ -1.11
Ctdnep1Q3TP92 Gm19238-201ENSMUST00000221936 1260 ntBASIC8.09□□□□□ -1.11
Ctdnep1Q3TP92 Gm9315-201ENSMUST00000222696 908 ntBASIC8.09□□□□□ -1.11
Ctdnep1Q3TP92 AC164436.1-201ENSMUST00000227074 772 ntBASIC8.09□□□□□ -1.11
Ctdnep1Q3TP92 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Ctdnep1Q3TP92 Scgb1b27-201ENSMUST00000085618 493 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ctdnep1Q3TP92 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Ctdnep1Q3TP92 Gm19938-201ENSMUST00000192692 3259 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Ctdnep1Q3TP92 Gm42885-201ENSMUST00000200763 4214 ntBASIC8.09□□□□□ -1.11
Ctdnep1Q3TP92 Amy2b-201ENSMUST00000120184 1577 ntBASIC8.09□□□□□ -1.11
Ctdnep1Q3TP92 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Ctdnep1Q3TP92 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Ctdnep1Q3TP92 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
Ctdnep1Q3TP92 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
Ctdnep1Q3TP92 Sim1-201ENSMUST00000020071 7355 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
Ctdnep1Q3TP92 AC138765.2-202ENSMUST00000228418 3435 ntBASIC8.09□□□□□ -1.12
Ctdnep1Q3TP92 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.12
Ctdnep1Q3TP92 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ctdnep1Q3TP92 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ctdnep1Q3TP92 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Ctdnep1Q3TP92 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ctdnep1Q3TP92 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ctdnep1Q3TP92 CT030185.1-201ENSMUST00000222940 2289 ntBASIC8.08□□□□□ -1.12
Ctdnep1Q3TP92 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Ctdnep1Q3TP92 Dus4l-201ENSMUST00000020977 1773 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ctdnep1Q3TP92 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Ctdnep1Q3TP92 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ctdnep1Q3TP92 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ctdnep1Q3TP92 Gm22781-201ENSMUST00000104083 137 ntBASIC8.08□□□□□ -1.12
Ctdnep1Q3TP92 Gm7091-201ENSMUST00000116438 586 ntBASIC8.08□□□□□ -1.12
Ctdnep1Q3TP92 Gm5319-201ENSMUST00000118965 873 ntBASIC8.08□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms