Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm42969-201ENSMUST00000199858 3631 ntBASIC9.15□□□□□ -0.94
Smarcc1P97496 Edar-201ENSMUST00000003312 3637 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smarcc1P97496 Vezt-201ENSMUST00000047711 4479 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smarcc1P97496 Gm4961-201ENSMUST00000197982 2249 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Smarcc1P97496 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC9.15□□□□□ -0.94
Smarcc1P97496 Rian-209ENSMUST00000182406 3476 ntBASIC9.15□□□□□ -0.94
Smarcc1P97496 Cbx3-204ENSMUST00000114446 1719 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Smarcc1P97496 AC122769.1-201ENSMUST00000226930 1714 ntBASIC9.15□□□□□ -0.94
Smarcc1P97496 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Smarcc1P97496 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Smarcc1P97496 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smarcc1P97496 Gm11257-201ENSMUST00000121313 315 ntBASIC9.15□□□□□ -0.94
Smarcc1P97496 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC9.15□□□□□ -0.94
Smarcc1P97496 Gm13669-201ENSMUST00000122366 457 ntBASIC9.15□□□□□ -0.94
Smarcc1P97496 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smarcc1P97496 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Smarcc1P97496 Gm9359-201ENSMUST00000163721 1221 ntBASIC9.15□□□□□ -0.94
Smarcc1P97496 Gm5611-201ENSMUST00000164523 852 ntBASIC9.15□□□□□ -0.94
Smarcc1P97496 Gm29509-201ENSMUST00000185716 321 ntBASIC9.15□□□□□ -0.94
Smarcc1P97496 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC9.15□□□□□ -0.94
Smarcc1P97496 Gm44387-201ENSMUST00000196298 145 ntBASIC9.15□□□□□ -0.94
Smarcc1P97496 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Smarcc1P97496 Gm7452-201ENSMUST00000200764 788 ntBASIC9.15□□□□□ -0.94
Smarcc1P97496 Gm44561-201ENSMUST00000208869 264 ntBASIC9.15□□□□□ -0.94
Smarcc1P97496 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smarcc1P97496 AC127242.3-201ENSMUST00000222009 580 ntBASIC9.15□□□□□ -0.94
Smarcc1P97496 AC165157.1-201ENSMUST00000222981 580 ntBASIC9.15□□□□□ -0.94
Smarcc1P97496 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Smarcc1P97496 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Smarcc1P97496 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smarcc1P97496 C1s1-204ENSMUST00000162443 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smarcc1P97496 Mbnl2-203ENSMUST00000226800 3328 ntBASIC9.15□□□□□ -0.94
Smarcc1P97496 Pfkfb2-211ENSMUST00000189534 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smarcc1P97496 Trpv5-201ENSMUST00000031901 3243 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Smarcc1P97496 AC159264.1-202ENSMUST00000224856 3162 ntBASIC9.15□□□□□ -0.95
Smarcc1P97496 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
Smarcc1P97496 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
Smarcc1P97496 Gm43571-201ENSMUST00000200067 3098 ntBASIC9.15□□□□□ -0.95
Smarcc1P97496 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.95
Smarcc1P97496 Ms4a6b-205ENSMUST00000163078 2680 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
Smarcc1P97496 Fer1l6-203ENSMUST00000161028 5714 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
Smarcc1P97496 Sprr2a1-201ENSMUST00000074449 3003 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Smarcc1P97496 Cyp1a1-201ENSMUST00000034865 2621 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Smarcc1P97496 Nolc1-201ENSMUST00000165017 3634 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smarcc1P97496 Klf5-202ENSMUST00000226784 2852 ntBASIC9.14□□□□□ -0.95
Smarcc1P97496 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Smarcc1P97496 Zfp14-202ENSMUST00000207072 2835 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smarcc1P97496 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smarcc1P97496 Unc45b-202ENSMUST00000108160 4152 ntAPPRIS ALT1 TSL 5 BASIC9.14□□□□□ -0.95
Smarcc1P97496 Tmed5-201ENSMUST00000002837 3800 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smarcc1P97496 Mcm10-201ENSMUST00000027980 3494 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smarcc1P97496 Gm14244-201ENSMUST00000155688 2410 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Smarcc1P97496 Asb14-201ENSMUST00000090337 2062 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Smarcc1P97496 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Smarcc1P97496 Ephb2-202ENSMUST00000105845 10902 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smarcc1P97496 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Smarcc1P97496 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
Smarcc1P97496 Tpo-201ENSMUST00000021005 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smarcc1P97496 Afap1l2-201ENSMUST00000111584 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smarcc1P97496 Gm26939-201ENSMUST00000177146 2261 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Smarcc1P97496 Gm14891-201ENSMUST00000117378 596 ntBASIC9.14□□□□□ -0.95
Smarcc1P97496 Gm13196-201ENSMUST00000118297 379 ntBASIC9.14□□□□□ -0.95
Smarcc1P97496 Gm14727-201ENSMUST00000118526 525 ntBASIC9.14□□□□□ -0.95
Smarcc1P97496 Gm12959-201ENSMUST00000119396 403 ntBASIC9.14□□□□□ -0.95
Smarcc1P97496 Gm13754-201ENSMUST00000120486 998 ntBASIC9.14□□□□□ -0.95
Smarcc1P97496 Gm14721-201ENSMUST00000121381 525 ntBASIC9.14□□□□□ -0.95
Smarcc1P97496 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC9.14□□□□□ -0.95
Smarcc1P97496 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC9.14□□□□□ -0.95
Smarcc1P97496 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC9.14□□□□□ -0.95
Smarcc1P97496 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC9.14□□□□□ -0.95
Smarcc1P97496 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC9.14□□□□□ -0.95
Smarcc1P97496 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC9.14□□□□□ -0.95
Smarcc1P97496 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Smarcc1P97496 Gm5272-201ENSMUST00000182730 982 ntBASIC9.14□□□□□ -0.95
Smarcc1P97496 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC9.14□□□□□ -0.95
Smarcc1P97496 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC9.14□□□□□ -0.95
Smarcc1P97496 Gm28801-201ENSMUST00000188761 449 ntBASIC9.14□□□□□ -0.95
Smarcc1P97496 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC9.14□□□□□ -0.95
Smarcc1P97496 Gm18699-201ENSMUST00000190713 243 ntBASIC9.14□□□□□ -0.95
Smarcc1P97496 Gm24826-202ENSMUST00000197298 216 ntBASIC9.14□□□□□ -0.95
Smarcc1P97496 Gm8924-201ENSMUST00000197405 1132 ntBASIC9.14□□□□□ -0.95
Smarcc1P97496 Gm21040-201ENSMUST00000199493 1132 ntBASIC9.14□□□□□ -0.95
Smarcc1P97496 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC9.14□□□□□ -0.95
Smarcc1P97496 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Smarcc1P97496 AC124778.1-201ENSMUST00000216013 162 ntBASIC9.14□□□□□ -0.95
Smarcc1P97496 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Smarcc1P97496 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC9.14□□□□□ -0.95
Smarcc1P97496 Gm4808-201ENSMUST00000222283 1203 ntBASIC9.14□□□□□ -0.95
Smarcc1P97496 AC187103.4-201ENSMUST00000225399 300 ntBASIC9.14□□□□□ -0.95
Smarcc1P97496 CT030194.1-201ENSMUST00000225507 532 ntBASIC9.14□□□□□ -0.95
Smarcc1P97496 CT009556.4-201ENSMUST00000227092 200 ntBASIC9.14□□□□□ -0.95
Smarcc1P97496 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC9.14□□□□□ -0.95
Smarcc1P97496 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Smarcc1P97496 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Smarcc1P97496 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Smarcc1P97496 Olfr1-201ENSMUST00000120303 3433 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smarcc1P97496 Rab39b-201ENSMUST00000033545 3401 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smarcc1P97496 Olfr859-203ENSMUST00000217280 9596 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Smarcc1P97496 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Smarcc1P97496 Cep72-201ENSMUST00000036456 3641 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 280.3 ms