Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm28958-201ENSMUST00000185864 703 ntBASIC8.25□□□□□ -1.09
Hmgb1P63158 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb1P63158 Gm17970-201ENSMUST00000192199 685 ntBASIC8.25□□□□□ -1.09
Hmgb1P63158 Gm19002-201ENSMUST00000192649 1012 ntBASIC8.25□□□□□ -1.09
Hmgb1P63158 Gm38047-201ENSMUST00000193690 1133 ntBASIC8.25□□□□□ -1.09
Hmgb1P63158 Cnih4-205ENSMUST00000193907 531 ntTSL 2 BASIC8.25□□□□□ -1.09
Hmgb1P63158 Gm37395-201ENSMUST00000194721 697 ntBASIC8.25□□□□□ -1.09
Hmgb1P63158 Gm18985-201ENSMUST00000196472 1079 ntBASIC8.25□□□□□ -1.09
Hmgb1P63158 Gm43243-201ENSMUST00000199964 278 ntBASIC8.25□□□□□ -1.09
Hmgb1P63158 Gm43809-201ENSMUST00000200694 338 ntTSL 3 BASIC8.25□□□□□ -1.09
Hmgb1P63158 Gm43699-201ENSMUST00000201312 818 ntTSL 3 BASIC8.25□□□□□ -1.09
Hmgb1P63158 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb1P63158 Olfr214-202ENSMUST00000203867 1255 ntAPPRIS P1 TSL 3 BASIC8.25□□□□□ -1.09
Hmgb1P63158 D830044I16Rik-203ENSMUST00000205437 1016 ntAPPRIS P5 TSL 5 BASIC8.25□□□□□ -1.09
Hmgb1P63158 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC8.25□□□□□ -1.09
Hmgb1P63158 Gm33926-201ENSMUST00000208755 357 ntTSL 2 BASIC8.25□□□□□ -1.09
Hmgb1P63158 Gm18378-201ENSMUST00000216245 628 ntBASIC8.25□□□□□ -1.09
Hmgb1P63158 Gm8058-201ENSMUST00000217247 587 ntBASIC8.25□□□□□ -1.09
Hmgb1P63158 Gm4803-201ENSMUST00000218729 1279 ntBASIC8.25□□□□□ -1.09
Hmgb1P63158 4933409F18Rik-201ENSMUST00000221910 1267 ntTSL 5 BASIC8.25□□□□□ -1.09
Hmgb1P63158 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC8.25□□□□□ -1.09
Hmgb1P63158 Gm4804-203ENSMUST00000222542 577 ntTSL 3 BASIC8.25□□□□□ -1.09
Hmgb1P63158 AC164294.1-201ENSMUST00000224682 688 ntBASIC8.25□□□□□ -1.09
Hmgb1P63158 AC163638.1-201ENSMUST00000224818 392 ntBASIC8.25□□□□□ -1.09
Hmgb1P63158 AV026068-225ENSMUST00000225042 490 ntBASIC8.25□□□□□ -1.09
Hmgb1P63158 Lyzl1-201ENSMUST00000025076 846 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb1P63158 Cst13-201ENSMUST00000046589 783 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb1P63158 Gm24207-201ENSMUST00000082781 108 ntBASIC8.25□□□□□ -1.09
Hmgb1P63158 Gm10697-201ENSMUST00000091692 1023 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Hmgb1P63158 Tardbp-203ENSMUST00000095719 1011 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb1P63158 Tdpoz5-201ENSMUST00000098879 1023 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Hmgb1P63158 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Hmgb1P63158 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb1P63158 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb1P63158 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb1P63158 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb1P63158 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Hmgb1P63158 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Hmgb1P63158 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb1P63158 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb1P63158 Gm20768-201ENSMUST00000199527 2338 ntBASIC8.25□□□□□ -1.09
Hmgb1P63158 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb1P63158 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC8.25□□□□□ -1.09
Hmgb1P63158 Gm6350-201ENSMUST00000195099 1339 ntBASIC8.25□□□□□ -1.09
Hmgb1P63158 AC163296.2-201ENSMUST00000220177 1315 ntBASIC8.25□□□□□ -1.09
Hmgb1P63158 Gm14035-201ENSMUST00000117596 1475 ntBASIC8.25□□□□□ -1.09
Hmgb1P63158 Nasp-203ENSMUST00000081182 1461 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb1P63158 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
Hmgb1P63158 Akap7-201ENSMUST00000041984 2092 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb1P63158 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb1P63158 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Hmgb1P63158 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb1P63158 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb1P63158 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb1P63158 Gm38381-201ENSMUST00000193594 2275 ntBASIC8.24□□□□□ -1.09
Hmgb1P63158 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb1P63158 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Hmgb1P63158 Mterf1b-201ENSMUST00000177258 1368 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb1P63158 Ccdc150-201ENSMUST00000027128 3807 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb1P63158 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC8.24□□□□□ -1.09
Hmgb1P63158 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC8.24□□□□□ -1.09
Hmgb1P63158 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Hmgb1P63158 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Hmgb1P63158 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb1P63158 AC154270.2-201ENSMUST00000226755 2306 ntBASIC8.24□□□□□ -1.09
Hmgb1P63158 Zrsr1-201ENSMUST00000049506 3282 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Hmgb1P63158 Gm19801-201ENSMUST00000218231 1882 ntBASIC8.24□□□□□ -1.09
Hmgb1P63158 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb1P63158 Olfr225-202ENSMUST00000213169 2658 ntAPPRIS P5 TSL 5 BASIC8.24□□□□□ -1.09
Hmgb1P63158 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC8.24□□□□□ -1.09
Hmgb1P63158 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb1P63158 Gm44898-201ENSMUST00000205934 2223 ntBASIC8.24□□□□□ -1.09
Hmgb1P63158 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb1P63158 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Hmgb1P63158 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
Hmgb1P63158 Gm15422-201ENSMUST00000117453 541 ntBASIC8.24□□□□□ -1.09
Hmgb1P63158 Gm14749-201ENSMUST00000121269 333 ntBASIC8.24□□□□□ -1.09
Hmgb1P63158 Lrrc8dos-201ENSMUST00000135958 586 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb1P63158 Gm11948-201ENSMUST00000142322 539 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb1P63158 Gm16143-201ENSMUST00000155982 538 ntTSL 5 BASIC8.24□□□□□ -1.09
Hmgb1P63158 Gm10804-202ENSMUST00000162565 867 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb1P63158 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Hmgb1P63158 Gm21999-201ENSMUST00000165985 387 ntBASIC8.24□□□□□ -1.09
Hmgb1P63158 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb1P63158 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Hmgb1P63158 Gm17129-201ENSMUST00000168168 505 ntBASIC8.24□□□□□ -1.09
Hmgb1P63158 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Hmgb1P63158 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Hmgb1P63158 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC8.24□□□□□ -1.09
Hmgb1P63158 Mir5128-201ENSMUST00000175217 84 ntBASIC8.24□□□□□ -1.09
Hmgb1P63158 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Hmgb1P63158 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Hmgb1P63158 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Hmgb1P63158 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Hmgb1P63158 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Hmgb1P63158 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Hmgb1P63158 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Hmgb1P63158 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Hmgb1P63158 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Hmgb1P63158 Gm19057-201ENSMUST00000194329 1197 ntBASIC8.24□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 105 ms