Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm21815-201ENSMUST00000178213 664 ntBASIC6.73□□□□□ -1.33
Hoxd3P09027 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC6.73□□□□□ -1.33
Hoxd3P09027 Gm29534-201ENSMUST00000187328 382 ntBASIC6.73□□□□□ -1.33
Hoxd3P09027 Gm29651-201ENSMUST00000189088 697 ntBASIC6.73□□□□□ -1.33
Hoxd3P09027 Mir124-2hg-205ENSMUST00000189467 173 ntTSL 5 BASIC6.73□□□□□ -1.33
Hoxd3P09027 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Hoxd3P09027 Gm20802-201ENSMUST00000190832 698 ntBASIC6.73□□□□□ -1.33
Hoxd3P09027 Gm37209-201ENSMUST00000194109 1276 ntBASIC6.73□□□□□ -1.33
Hoxd3P09027 Ighv1-68-201ENSMUST00000198789 294 ntBASIC6.73□□□□□ -1.33
Hoxd3P09027 Gm7463-201ENSMUST00000201541 547 ntBASIC6.73□□□□□ -1.33
Hoxd3P09027 Crcp-206ENSMUST00000202756 600 ntTSL 2 BASIC6.73□□□□□ -1.33
Hoxd3P09027 Gm5305-201ENSMUST00000204010 746 ntBASIC6.73□□□□□ -1.33
Hoxd3P09027 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC6.73□□□□□ -1.33
Hoxd3P09027 Gm4275-203ENSMUST00000210214 1298 ntTSL 5 BASIC6.73□□□□□ -1.33
Hoxd3P09027 Gm1943-201ENSMUST00000211890 174 ntBASIC6.73□□□□□ -1.33
Hoxd3P09027 Gm8948-201ENSMUST00000216371 370 ntBASIC6.73□□□□□ -1.33
Hoxd3P09027 Gm18863-201ENSMUST00000217004 1299 ntBASIC6.73□□□□□ -1.33
Hoxd3P09027 Gm5917-201ENSMUST00000217638 721 ntBASIC6.73□□□□□ -1.33
Hoxd3P09027 AC166263.1-201ENSMUST00000218586 238 ntBASIC6.73□□□□□ -1.33
Hoxd3P09027 Gm6869-201ENSMUST00000220334 734 ntBASIC6.73□□□□□ -1.33
Hoxd3P09027 AC126554.4-201ENSMUST00000221055 409 ntBASIC6.73□□□□□ -1.33
Hoxd3P09027 AC073562.1-201ENSMUST00000222117 401 ntBASIC6.73□□□□□ -1.33
Hoxd3P09027 CT009713.9-201ENSMUST00000223604 389 ntBASIC6.73□□□□□ -1.33
Hoxd3P09027 AC118006.3-201ENSMUST00000223948 1176 ntBASIC6.73□□□□□ -1.33
Hoxd3P09027 AC165281.1-201ENSMUST00000225713 1011 ntBASIC6.73□□□□□ -1.33
Hoxd3P09027 Tssk4-203ENSMUST00000226497 1235 ntBASIC6.73□□□□□ -1.33
Hoxd3P09027 AC154598.2-201ENSMUST00000227114 604 ntBASIC6.73□□□□□ -1.33
Hoxd3P09027 AC107369.1-201ENSMUST00000227373 860 ntBASIC6.73□□□□□ -1.33
Hoxd3P09027 AC122459.3-201ENSMUST00000228508 1042 ntBASIC6.73□□□□□ -1.33
Hoxd3P09027 4930553J12Rik-201ENSMUST00000023648 381 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Hoxd3P09027 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Hoxd3P09027 Gm10036-201ENSMUST00000079733 537 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Hoxd3P09027 Gm24921-201ENSMUST00000083024 107 ntBASIC6.73□□□□□ -1.33
Hoxd3P09027 Olfr1044-201ENSMUST00000099906 945 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Hoxd3P09027 Fto-201ENSMUST00000069718 3564 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Hoxd3P09027 Gm6733-201ENSMUST00000118302 1920 ntBASIC6.73□□□□□ -1.33
Hoxd3P09027 Klrb1c-203ENSMUST00000174404 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Hoxd3P09027 Kbtbd3-202ENSMUST00000212221 2313 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Hoxd3P09027 Tbata-204ENSMUST00000122261 1431 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Hoxd3P09027 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Hoxd3P09027 C6-204ENSMUST00000162585 2876 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Hoxd3P09027 Arhgef9-205ENSMUST00000113883 5399 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Hoxd3P09027 Atxn3-201ENSMUST00000021606 5363 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
Hoxd3P09027 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Hoxd3P09027 Dph5-201ENSMUST00000043342 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Hoxd3P09027 Eny2-201ENSMUST00000060652 3000 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Hoxd3P09027 Gm30165-201ENSMUST00000218769 1961 ntTSL 5 BASIC6.73□□□□□ -1.33
Hoxd3P09027 Stat1-206ENSMUST00000186857 4241 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Hoxd3P09027 1700010N08Rik-202ENSMUST00000188166 1323 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Hoxd3P09027 Slamf9-201ENSMUST00000027830 1313 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Hoxd3P09027 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC6.73□□□□□ -1.33
Hoxd3P09027 Gm20775-201ENSMUST00000100115 1851 ntBASIC6.73□□□□□ -1.33
Hoxd3P09027 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC6.73□□□□□ -1.33
Hoxd3P09027 Edar-201ENSMUST00000003312 3637 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxd3P09027 Trim66-202ENSMUST00000106739 9250 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxd3P09027 Rffl-203ENSMUST00000074515 4973 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Hoxd3P09027 Taok3-210ENSMUST00000179276 4302 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Hoxd3P09027 Lias-201ENSMUST00000031101 2996 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxd3P09027 Zfp541-203ENSMUST00000210805 4084 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxd3P09027 Gm10824-201ENSMUST00000220000 2198 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxd3P09027 F730016J06Rik-202ENSMUST00000128888 3699 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxd3P09027 Grb10-203ENSMUST00000109654 4755 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxd3P09027 Rfx2-202ENSMUST00000086801 3278 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxd3P09027 Gm20518-201ENSMUST00000150068 3811 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
Hoxd3P09027 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxd3P09027 Mtfr1-203ENSMUST00000119865 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxd3P09027 Baalc-201ENSMUST00000163313 2492 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxd3P09027 AC113031.7-201ENSMUST00000228609 1928 ntBASIC6.72□□□□□ -1.33
Hoxd3P09027 Klf10-201ENSMUST00000074043 3044 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxd3P09027 AC142266.1-202ENSMUST00000227784 3733 ntBASIC6.72□□□□□ -1.33
Hoxd3P09027 Tro-207ENSMUST00000163969 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxd3P09027 Unc93a-201ENSMUST00000084966 2643 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxd3P09027 Gm37091-201ENSMUST00000195455 2087 ntBASIC6.72□□□□□ -1.33
Hoxd3P09027 Gm45415-201ENSMUST00000209644 2074 ntBASIC6.72□□□□□ -1.33
Hoxd3P09027 Ndst2-201ENSMUST00000047490 3305 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxd3P09027 Gm26965-201ENSMUST00000167914 1520 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
Hoxd3P09027 Xntrpc-201ENSMUST00000084843 4173 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Hoxd3P09027 Xntrpc-202ENSMUST00000094129 4150 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Hoxd3P09027 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
Hoxd3P09027 Ces1g-201ENSMUST00000044602 2388 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxd3P09027 Btbd16-204ENSMUST00000208593 1849 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Hoxd3P09027 Gm24608-201ENSMUST00000104381 136 ntBASIC6.72□□□□□ -1.33
Hoxd3P09027 Oprm1-217ENSMUST00000105615 1258 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxd3P09027 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
Hoxd3P09027 Igkv13-87-201ENSMUST00000114214 286 ntBASIC6.72□□□□□ -1.33
Hoxd3P09027 Gm13768-201ENSMUST00000116469 929 ntBASIC6.72□□□□□ -1.33
Hoxd3P09027 Gm12492-201ENSMUST00000117665 564 ntBASIC6.72□□□□□ -1.33
Hoxd3P09027 Gm13473-201ENSMUST00000119289 367 ntBASIC6.72□□□□□ -1.33
Hoxd3P09027 Gm9050-201ENSMUST00000119501 448 ntBASIC6.72□□□□□ -1.33
Hoxd3P09027 Mup-ps24-201ENSMUST00000119939 286 ntBASIC6.72□□□□□ -1.33
Hoxd3P09027 Gm12879-201ENSMUST00000120003 1182 ntBASIC6.72□□□□□ -1.33
Hoxd3P09027 Gm14574-201ENSMUST00000120644 279 ntBASIC6.72□□□□□ -1.33
Hoxd3P09027 Gm378-201ENSMUST00000120797 820 ntBASIC6.72□□□□□ -1.33
Hoxd3P09027 Gm15532-201ENSMUST00000121192 884 ntBASIC6.72□□□□□ -1.33
Hoxd3P09027 Gm13162-201ENSMUST00000121481 454 ntBASIC6.72□□□□□ -1.33
Hoxd3P09027 Gm13360-201ENSMUST00000121607 799 ntBASIC6.72□□□□□ -1.33
Hoxd3P09027 Gm14143-201ENSMUST00000121686 357 ntBASIC6.72□□□□□ -1.33
Hoxd3P09027 Gm24628-201ENSMUST00000122761 289 ntBASIC6.72□□□□□ -1.33
Hoxd3P09027 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
Hoxd3P09027 Gm15627-201ENSMUST00000140421 437 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms