Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Hmgb3O54879 Lypd8-201ENSMUST00000013787 1093 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Hmgb3O54879 Gm13269-201ENSMUST00000143458 655 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Hmgb3O54879 Gm15347-201ENSMUST00000145372 385 ntTSL 3 BASIC5.75□□□□□ -1.49
Hmgb3O54879 Gm8813-201ENSMUST00000155930 595 ntBASIC5.75□□□□□ -1.49
Hmgb3O54879 Gm24899-201ENSMUST00000158892 73 ntBASIC5.75□□□□□ -1.49
Hmgb3O54879 Gm16573-203ENSMUST00000162231 807 ntTSL 2 BASIC5.75□□□□□ -1.49
Hmgb3O54879 Gm17097-201ENSMUST00000166414 714 ntBASIC5.75□□□□□ -1.49
Hmgb3O54879 Scgb1b27-202ENSMUST00000173387 762 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
Hmgb3O54879 Gm12424-201ENSMUST00000179673 447 ntBASIC5.75□□□□□ -1.49
Hmgb3O54879 Gm17828-201ENSMUST00000183380 799 ntBASIC5.75□□□□□ -1.49
Hmgb3O54879 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Hmgb3O54879 Gm27177-204ENSMUST00000184491 602 ntTSL 3 BASIC5.75□□□□□ -1.49
Hmgb3O54879 Gm28462-201ENSMUST00000185217 374 ntTSL 5 BASIC5.75□□□□□ -1.49
Hmgb3O54879 Gm29561-201ENSMUST00000187838 631 ntTSL 3 BASIC5.75□□□□□ -1.49
Hmgb3O54879 Gm29003-202ENSMUST00000190434 453 ntTSL 5 BASIC5.75□□□□□ -1.49
Hmgb3O54879 Gm28264-201ENSMUST00000190657 398 ntTSL 5 BASIC5.75□□□□□ -1.49
Hmgb3O54879 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC5.75□□□□□ -1.49
Hmgb3O54879 Gm38078-201ENSMUST00000192771 392 ntBASIC5.75□□□□□ -1.49
Hmgb3O54879 Gm17965-201ENSMUST00000193904 517 ntBASIC5.75□□□□□ -1.49
Hmgb3O54879 Slamf6-204ENSMUST00000194561 984 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Hmgb3O54879 Gm40319-201ENSMUST00000199785 481 ntBASIC5.75□□□□□ -1.49
Hmgb3O54879 Gm4259-201ENSMUST00000206489 758 ntBASIC5.75□□□□□ -1.49
Hmgb3O54879 Gm3198-201ENSMUST00000208725 1026 ntBASIC5.75□□□□□ -1.49
Hmgb3O54879 Rnf212-206ENSMUST00000212212 924 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Hmgb3O54879 2310003N18Rik-201ENSMUST00000215655 458 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Hmgb3O54879 AC092710.1-201ENSMUST00000221005 192 ntBASIC5.75□□□□□ -1.49
Hmgb3O54879 Gpihbp1-201ENSMUST00000023243 825 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Hmgb3O54879 Defb3-201ENSMUST00000033852 275 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Hmgb3O54879 Spink6-201ENSMUST00000068473 587 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Hmgb3O54879 Gm24143-201ENSMUST00000082633 145 ntBASIC5.75□□□□□ -1.49
Hmgb3O54879 Gm22053-201ENSMUST00000083394 200 ntBASIC5.75□□□□□ -1.49
Hmgb3O54879 Gm16020-201ENSMUST00000084281 210 ntBASIC5.75□□□□□ -1.49
Hmgb3O54879 Gatad2b-203ENSMUST00000197988 1815 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Hmgb3O54879 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Hmgb3O54879 AC107742.1-201ENSMUST00000227769 1390 ntBASIC5.75□□□□□ -1.49
Hmgb3O54879 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Hmgb3O54879 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Hmgb3O54879 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC5.75□□□□□ -1.49
Hmgb3O54879 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Hmgb3O54879 Gm44141-201ENSMUST00000204231 1583 ntBASIC5.75□□□□□ -1.49
Hmgb3O54879 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
Hmgb3O54879 Slc24a2-202ENSMUST00000107155 2171 ntTSL 5 BASIC5.74□□□□□ -1.49
Hmgb3O54879 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Hmgb3O54879 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Hmgb3O54879 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Hmgb3O54879 Pramef20-201ENSMUST00000121109 1434 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Hmgb3O54879 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Hmgb3O54879 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Hmgb3O54879 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC5.74□□□□□ -1.49
Hmgb3O54879 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC5.74□□□□□ -1.49
Hmgb3O54879 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Hmgb3O54879 Gm18726-201ENSMUST00000218175 2010 ntBASIC5.74□□□□□ -1.49
Hmgb3O54879 Gm43395-201ENSMUST00000198717 2240 ntBASIC5.74□□□□□ -1.49
Hmgb3O54879 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Hmgb3O54879 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Hmgb3O54879 Gm33167-201ENSMUST00000201933 2643 ntBASIC5.74□□□□□ -1.49
Hmgb3O54879 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Hmgb3O54879 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Hmgb3O54879 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Hmgb3O54879 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Hmgb3O54879 Gm15913-201ENSMUST00000118492 331 ntBASIC5.74□□□□□ -1.49
Hmgb3O54879 Gm6630-201ENSMUST00000119199 454 ntBASIC5.74□□□□□ -1.49
Hmgb3O54879 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC5.74□□□□□ -1.49
Hmgb3O54879 Gm23657-201ENSMUST00000122623 294 ntBASIC5.74□□□□□ -1.49
Hmgb3O54879 n-R5s76-201ENSMUST00000122700 113 ntBASIC5.74□□□□□ -1.49
Hmgb3O54879 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Hmgb3O54879 Wdr61-205ENSMUST00000130368 1162 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Hmgb3O54879 Gm11588-201ENSMUST00000141758 658 ntTSL 5 BASIC5.74□□□□□ -1.49
Hmgb3O54879 Gm15265-202ENSMUST00000143287 814 ntTSL 3 BASIC5.74□□□□□ -1.49
Hmgb3O54879 Gm14487-201ENSMUST00000145413 1259 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Hmgb3O54879 Ifrd1-204ENSMUST00000165027 1293 ntTSL 5 BASIC5.74□□□□□ -1.49
Hmgb3O54879 Gm20529-201ENSMUST00000173683 203 ntTSL 5 BASIC5.74□□□□□ -1.49
Hmgb3O54879 Gm25947-201ENSMUST00000180343 110 ntBASIC5.74□□□□□ -1.49
Hmgb3O54879 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Hmgb3O54879 Gm7436-201ENSMUST00000187229 391 ntBASIC5.74□□□□□ -1.49
Hmgb3O54879 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC5.74□□□□□ -1.49
Hmgb3O54879 Gm10416-201ENSMUST00000197379 645 ntBASIC5.74□□□□□ -1.49
Hmgb3O54879 Gm5857-201ENSMUST00000198953 493 ntBASIC5.74□□□□□ -1.49
Hmgb3O54879 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Hmgb3O54879 Gm43929-201ENSMUST00000203025 409 ntBASIC5.74□□□□□ -1.49
Hmgb3O54879 Gm33096-201ENSMUST00000210189 493 ntBASIC5.74□□□□□ -1.49
Hmgb3O54879 AC152946.3-201ENSMUST00000219424 280 ntBASIC5.74□□□□□ -1.49
Hmgb3O54879 AC123867.1-201ENSMUST00000224990 816 ntBASIC5.74□□□□□ -1.49
Hmgb3O54879 CT009711.4-201ENSMUST00000225685 198 ntBASIC5.74□□□□□ -1.49
Hmgb3O54879 CT030732.1-201ENSMUST00000226885 246 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Hmgb3O54879 Wdr61-201ENSMUST00000051822 1187 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Hmgb3O54879 Wdr66-201ENSMUST00000069311 978 ntTSL 5 BASIC5.74□□□□□ -1.49
Hmgb3O54879 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC5.74□□□□□ -1.49
Hmgb3O54879 Olfr1113-201ENSMUST00000079966 981 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Hmgb3O54879 Gm24924-201ENSMUST00000084007 164 ntBASIC5.74□□□□□ -1.49
Hmgb3O54879 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Hmgb3O54879 Trim12a-202ENSMUST00000106837 1389 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Hmgb3O54879 Ldhc-201ENSMUST00000014545 1370 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Hmgb3O54879 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC5.74□□□□□ -1.49
Hmgb3O54879 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC5.74□□□□□ -1.49
Hmgb3O54879 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Hmgb3O54879 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Hmgb3O54879 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Hmgb3O54879 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms