Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Col4a6B1AVK5 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Col4a6B1AVK5 Plagl2-202ENSMUST00000109795 5571 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col4a6B1AVK5 Nwd1-201ENSMUST00000093427 7840 ntTSL 5 BASIC7.3□□□□□ -1.24
Col4a6B1AVK5 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col4a6B1AVK5 Kantr-207ENSMUST00000195280 4212 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
Col4a6B1AVK5 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC7.3□□□□□ -1.24
Col4a6B1AVK5 Ccdc150-201ENSMUST00000027128 3807 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col4a6B1AVK5 Ptprb-201ENSMUST00000092167 11911 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col4a6B1AVK5 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC7.3□□□□□ -1.24
Col4a6B1AVK5 Zfp275-201ENSMUST00000033731 6376 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col4a6B1AVK5 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Col4a6B1AVK5 Gm20236-201ENSMUST00000193037 4540 ntBASIC7.3□□□□□ -1.24
Col4a6B1AVK5 Gm37094-201ENSMUST00000193352 4540 ntBASIC7.3□□□□□ -1.24
Col4a6B1AVK5 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Col4a6B1AVK5 Dennd6a-204ENSMUST00000224248 2775 ntBASIC7.3□□□□□ -1.24
Col4a6B1AVK5 Myo7b-201ENSMUST00000134663 6621 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col4a6B1AVK5 Gas2l3-201ENSMUST00000099374 6748 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col4a6B1AVK5 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Col4a6B1AVK5 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC7.29□□□□□ -1.24
Col4a6B1AVK5 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC7.29□□□□□ -1.24
Col4a6B1AVK5 Myadm-204ENSMUST00000203566 4028 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Col4a6B1AVK5 Adam22-202ENSMUST00000050166 8969 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
Col4a6B1AVK5 Gm23311-201ENSMUST00000104152 134 ntBASIC7.29□□□□□ -1.24
Col4a6B1AVK5 Gm24069-201ENSMUST00000104512 127 ntBASIC7.29□□□□□ -1.24
Col4a6B1AVK5 Gm11821-201ENSMUST00000117335 979 ntBASIC7.29□□□□□ -1.24
Col4a6B1AVK5 Gm13991-201ENSMUST00000120190 648 ntBASIC7.29□□□□□ -1.24
Col4a6B1AVK5 Gm15194-201ENSMUST00000120453 434 ntBASIC7.29□□□□□ -1.24
Col4a6B1AVK5 Gm3810-201ENSMUST00000122413 476 ntBASIC7.29□□□□□ -1.24
Col4a6B1AVK5 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Col4a6B1AVK5 Gm6931-201ENSMUST00000183103 371 ntBASIC7.29□□□□□ -1.24
Col4a6B1AVK5 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC7.29□□□□□ -1.24
Col4a6B1AVK5 AC104906.1-201ENSMUST00000218122 913 ntBASIC7.29□□□□□ -1.24
Col4a6B1AVK5 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Col4a6B1AVK5 AC138765.3-201ENSMUST00000227981 423 ntBASIC7.29□□□□□ -1.24
Col4a6B1AVK5 Gm6776-201ENSMUST00000057752 900 ntBASIC7.29□□□□□ -1.24
Col4a6B1AVK5 Gm6990-201ENSMUST00000086830 348 ntBASIC7.29□□□□□ -1.24
Col4a6B1AVK5 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC7.29□□□□□ -1.24
Col4a6B1AVK5 AC154612.1-202ENSMUST00000224806 1725 ntBASIC7.29□□□□□ -1.24
Col4a6B1AVK5 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Col4a6B1AVK5 Nrip1-202ENSMUST00000121927 7868 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Col4a6B1AVK5 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Col4a6B1AVK5 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Col4a6B1AVK5 Dysf-203ENSMUST00000113818 6571 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Col4a6B1AVK5 Thg1l-202ENSMUST00000109254 2202 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Col4a6B1AVK5 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Col4a6B1AVK5 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC7.29□□□□□ -1.24
Col4a6B1AVK5 AC123738.2-201ENSMUST00000223791 1899 ntBASIC7.29□□□□□ -1.24
Col4a6B1AVK5 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Col4a6B1AVK5 Gm9030-201ENSMUST00000218405 2410 ntBASIC7.29□□□□□ -1.24
Col4a6B1AVK5 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Col4a6B1AVK5 Gm9029-201ENSMUST00000219232 2410 ntBASIC7.29□□□□□ -1.24
Col4a6B1AVK5 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Col4a6B1AVK5 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Col4a6B1AVK5 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
Col4a6B1AVK5 Ergic2-208ENSMUST00000136008 4174 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Col4a6B1AVK5 Nolc1-201ENSMUST00000165017 3634 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Col4a6B1AVK5 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Col4a6B1AVK5 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Col4a6B1AVK5 Lepr-201ENSMUST00000037552 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Col4a6B1AVK5 Adgrb3-205ENSMUST00000135518 5432 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Col4a6B1AVK5 Adgrb3-207ENSMUST00000151309 5448 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Col4a6B1AVK5 Ttll7-201ENSMUST00000037942 7394 ntAPPRIS P2 TSL 5 BASIC7.29□□□□□ -1.24
Col4a6B1AVK5 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Col4a6B1AVK5 Odf2-202ENSMUST00000046571 3959 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
Col4a6B1AVK5 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Col4a6B1AVK5 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Col4a6B1AVK5 n-R5s72-201ENSMUST00000104518 119 ntBASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Gm11902-201ENSMUST00000118849 270 ntBASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Gm2986-201ENSMUST00000121603 382 ntBASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Gm23426-201ENSMUST00000122483 318 ntBASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Gm25433-201ENSMUST00000158283 286 ntBASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Gm6055-201ENSMUST00000180532 378 ntBASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Gm5345-201ENSMUST00000183076 1014 ntBASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Gm37517-201ENSMUST00000194004 1289 ntBASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Gm37809-201ENSMUST00000195050 931 ntBASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Gm42443-201ENSMUST00000198084 1155 ntBASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Gm7769-201ENSMUST00000212900 933 ntBASIC7.28□□□□□ -1.24
Col4a6B1AVK5 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC7.28□□□□□ -1.24
Col4a6B1AVK5 AC158525.1-201ENSMUST00000223806 576 ntBASIC7.28□□□□□ -1.24
Col4a6B1AVK5 AC152394.1-201ENSMUST00000227360 1086 ntBASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Gm21731-201ENSMUST00000079524 489 ntBASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Gm38277-201ENSMUST00000195172 1367 ntBASIC7.28□□□□□ -1.24
Col4a6B1AVK5 AC116476.1-201ENSMUST00000226274 2318 ntBASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Klhl1-201ENSMUST00000022666 6645 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Gm44104-201ENSMUST00000204736 3777 ntBASIC7.28□□□□□ -1.24
Col4a6B1AVK5 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Col4a6B1AVK5 B020004J07Rik-202ENSMUST00000106919 1976 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Mpdz-216ENSMUST00000220807 6295 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
Col4a6B1AVK5 Paqr8-201ENSMUST00000068880 4704 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms