Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Scn3aA2ASI5 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Scn3aA2ASI5 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Scn3aA2ASI5 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC7.91□□□□□ -1.14
Scn3aA2ASI5 CT009711.2-201ENSMUST00000225352 934 ntBASIC7.91□□□□□ -1.14
Scn3aA2ASI5 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
Scn3aA2ASI5 Rhoh-201ENSMUST00000031106 5093 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Scn3aA2ASI5 Olfr484-202ENSMUST00000214722 4676 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
Scn3aA2ASI5 Stard13-202ENSMUST00000110483 5662 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
Scn3aA2ASI5 Dock9-206ENSMUST00000212181 7368 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Scn3aA2ASI5 Clasp1-206ENSMUST00000186349 7281 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
Scn3aA2ASI5 Gm37552-201ENSMUST00000193939 2520 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Scn3aA2ASI5 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Scn3aA2ASI5 Slfn4-202ENSMUST00000167596 3703 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Scn3aA2ASI5 Cntnap2-205ENSMUST00000199100 6279 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Scn3aA2ASI5 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Scn3aA2ASI5 AC123832.1-201ENSMUST00000214120 2371 ntBASIC7.91□□□□□ -1.14
Scn3aA2ASI5 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
Scn3aA2ASI5 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
Scn3aA2ASI5 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Scn3aA2ASI5 Atf6-201ENSMUST00000027974 7246 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Scn3aA2ASI5 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Scn3aA2ASI5 Ice1-201ENSMUST00000043493 7667 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
Scn3aA2ASI5 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC7.91□□□□□ -1.14
Scn3aA2ASI5 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Scn3aA2ASI5 Gm9144-201ENSMUST00000101625 1008 ntBASIC7.91□□□□□ -1.14
Scn3aA2ASI5 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC7.91□□□□□ -1.14
Scn3aA2ASI5 Gm8722-201ENSMUST00000121466 769 ntBASIC7.91□□□□□ -1.14
Scn3aA2ASI5 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC7.91□□□□□ -1.14
Scn3aA2ASI5 Gm24155-201ENSMUST00000175259 110 ntBASIC7.91□□□□□ -1.14
Scn3aA2ASI5 Gm22990-201ENSMUST00000175427 89 ntBASIC7.91□□□□□ -1.14
Scn3aA2ASI5 Gm38068-201ENSMUST00000192546 540 ntBASIC7.91□□□□□ -1.14
Scn3aA2ASI5 Gm9110-201ENSMUST00000219035 617 ntBASIC7.91□□□□□ -1.14
Scn3aA2ASI5 AW822073-201ENSMUST00000075305 555 ntBASIC7.91□□□□□ -1.14
Scn3aA2ASI5 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC7.91□□□□□ -1.14
Scn3aA2ASI5 Gm37138-201ENSMUST00000194564 2089 ntBASIC7.91□□□□□ -1.14
Scn3aA2ASI5 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC7.91□□□□□ -1.14
Scn3aA2ASI5 Mrpl35-201ENSMUST00000065103 3721 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Scn3aA2ASI5 Ankrd6-201ENSMUST00000035719 4683 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Scn3aA2ASI5 Actr6-201ENSMUST00000020109 1705 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Scn3aA2ASI5 AC122356.1-202ENSMUST00000227328 2758 ntBASIC7.91□□□□□ -1.14
Scn3aA2ASI5 Unc79-208ENSMUST00000179002 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Scn3aA2ASI5 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
Scn3aA2ASI5 Ctnnd1-203ENSMUST00000067232 6119 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Scn3aA2ASI5 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC7.91□□□□□ -1.14
Scn3aA2ASI5 Olfr524-202ENSMUST00000215815 5044 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
Scn3aA2ASI5 Fshr-201ENSMUST00000035701 2079 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Scn3aA2ASI5 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC7.9□□□□□ -1.14
Scn3aA2ASI5 Gm12540-201ENSMUST00000121938 319 ntBASIC7.9□□□□□ -1.14
Scn3aA2ASI5 Ino80c-202ENSMUST00000125169 756 ntTSL 3 BASIC7.9□□□□□ -1.14
Scn3aA2ASI5 Gm8192-201ENSMUST00000182196 958 ntBASIC7.9□□□□□ -1.14
Scn3aA2ASI5 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC7.9□□□□□ -1.14
Scn3aA2ASI5 AC122844.1-201ENSMUST00000195971 107 ntBASIC7.9□□□□□ -1.14
Scn3aA2ASI5 Gm43212-201ENSMUST00000198208 394 ntBASIC7.9□□□□□ -1.14
Scn3aA2ASI5 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC7.9□□□□□ -1.14
Scn3aA2ASI5 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC7.9□□□□□ -1.14
Scn3aA2ASI5 Gm7351-201ENSMUST00000210745 580 ntBASIC7.9□□□□□ -1.14
Scn3aA2ASI5 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC7.9□□□□□ -1.14
Scn3aA2ASI5 AC114008.1-201ENSMUST00000226193 937 ntBASIC7.9□□□□□ -1.14
Scn3aA2ASI5 AC154806.5-204ENSMUST00000228900 867 ntBASIC7.9□□□□□ -1.14
Scn3aA2ASI5 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Scn3aA2ASI5 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Scn3aA2ASI5 Gm26130-201ENSMUST00000083171 138 ntBASIC7.9□□□□□ -1.14
Scn3aA2ASI5 Snhg17-209ENSMUST00000186993 3144 ntBASIC7.9□□□□□ -1.14
Scn3aA2ASI5 Zfp652-202ENSMUST00000107717 10433 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
Scn3aA2ASI5 4931406B18Rik-208ENSMUST00000191516 2566 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.14
Scn3aA2ASI5 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Scn3aA2ASI5 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC7.9□□□□□ -1.15
Scn3aA2ASI5 Gm12187-201ENSMUST00000119584 1375 ntBASIC7.9□□□□□ -1.15
Scn3aA2ASI5 Muc4-201ENSMUST00000096106 11277 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.15
Scn3aA2ASI5 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
Scn3aA2ASI5 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.15
Scn3aA2ASI5 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC7.9□□□□□ -1.15
Scn3aA2ASI5 Gm16073-201ENSMUST00000116032 517 ntBASIC7.9□□□□□ -1.15
Scn3aA2ASI5 Gm12242-201ENSMUST00000118824 738 ntBASIC7.9□□□□□ -1.15
Scn3aA2ASI5 Gm12754-201ENSMUST00000121908 454 ntBASIC7.9□□□□□ -1.15
Scn3aA2ASI5 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
Scn3aA2ASI5 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC7.9□□□□□ -1.15
Scn3aA2ASI5 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC7.9□□□□□ -1.15
Scn3aA2ASI5 Gm19088-201ENSMUST00000198800 566 ntBASIC7.9□□□□□ -1.15
Scn3aA2ASI5 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC7.9□□□□□ -1.15
Scn3aA2ASI5 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC7.9□□□□□ -1.15
Scn3aA2ASI5 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
Scn3aA2ASI5 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC7.9□□□□□ -1.15
Scn3aA2ASI5 Mir106b-201ENSMUST00000083580 82 ntBASIC7.9□□□□□ -1.15
Scn3aA2ASI5 Gm29486-201ENSMUST00000088648 372 ntBASIC7.9□□□□□ -1.15
Scn3aA2ASI5 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Scn3aA2ASI5 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Scn3aA2ASI5 Gm46123-201ENSMUST00000217447 6424 ntTSL 5 BASIC7.89□□□□□ -1.15
Scn3aA2ASI5 Fam129a-205ENSMUST00000148810 6531 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Scn3aA2ASI5 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Scn3aA2ASI5 Naip1-204ENSMUST00000222155 5361 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Scn3aA2ASI5 Rufy3-201ENSMUST00000031229 4049 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Scn3aA2ASI5 Star-201ENSMUST00000033979 4046 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Scn3aA2ASI5 Gm2762-207ENSMUST00000202739 2665 ntBASIC7.89□□□□□ -1.15
Scn3aA2ASI5 AC154482.1-201ENSMUST00000223248 2483 ntBASIC7.89□□□□□ -1.15
Scn3aA2ASI5 Sprr2a1-201ENSMUST00000074449 3003 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Scn3aA2ASI5 Gm27048-201ENSMUST00000182891 4627 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Scn3aA2ASI5 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Scn3aA2ASI5 C78859-201ENSMUST00000212800 5943 ntBASIC7.89□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms