Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 AC159264.1-202ENSMUST00000224856 3162 ntBASIC9.85□□□□□ -0.83
Usp40Q8BWR4 Arpp21-202ENSMUST00000070218 3181 ntTSL 5 BASIC9.85□□□□□ -0.83
Usp40Q8BWR4 Greb1-212ENSMUST00000162112 8058 ntAPPRIS P3 TSL 5 BASIC9.85□□□□□ -0.83
Usp40Q8BWR4 Svil-210ENSMUST00000140448 7423 ntAPPRIS P3 TSL 5 BASIC9.85□□□□□ -0.83
Usp40Q8BWR4 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Usp40Q8BWR4 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Usp40Q8BWR4 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
Usp40Q8BWR4 Gm2065-201ENSMUST00000194697 2757 ntBASIC9.85□□□□□ -0.83
Usp40Q8BWR4 Retreg1-203ENSMUST00000226438 2783 ntBASIC9.85□□□□□ -0.83
Usp40Q8BWR4 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Usp40Q8BWR4 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC9.85□□□□□ -0.83
Usp40Q8BWR4 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC9.85□□□□□ -0.83
Usp40Q8BWR4 Gm14466-201ENSMUST00000119028 451 ntBASIC9.85□□□□□ -0.83
Usp40Q8BWR4 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC9.85□□□□□ -0.83
Usp40Q8BWR4 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC9.85□□□□□ -0.83
Usp40Q8BWR4 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC9.85□□□□□ -0.83
Usp40Q8BWR4 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Usp40Q8BWR4 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC9.85□□□□□ -0.83
Usp40Q8BWR4 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC9.85□□□□□ -0.83
Usp40Q8BWR4 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Usp40Q8BWR4 Zfp572-202ENSMUST00000184208 1078 ntBASIC9.85□□□□□ -0.83
Usp40Q8BWR4 Gm28929-201ENSMUST00000185330 1193 ntBASIC9.85□□□□□ -0.83
Usp40Q8BWR4 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC9.85□□□□□ -0.83
Usp40Q8BWR4 Gm37709-201ENSMUST00000195074 600 ntBASIC9.85□□□□□ -0.83
Usp40Q8BWR4 Gm45279-201ENSMUST00000210315 391 ntBASIC9.85□□□□□ -0.83
Usp40Q8BWR4 AC129323.1-201ENSMUST00000216733 470 ntBASIC9.85□□□□□ -0.83
Usp40Q8BWR4 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Usp40Q8BWR4 Gm4808-201ENSMUST00000222283 1203 ntBASIC9.85□□□□□ -0.83
Usp40Q8BWR4 Gm2754-201ENSMUST00000223383 589 ntBASIC9.85□□□□□ -0.83
Usp40Q8BWR4 CT030238.4-202ENSMUST00000226143 745 ntBASIC9.85□□□□□ -0.83
Usp40Q8BWR4 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Usp40Q8BWR4 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Usp40Q8BWR4 4921521D15Rik-201ENSMUST00000197578 1927 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Usp40Q8BWR4 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Usp40Q8BWR4 Narf-201ENSMUST00000103015 4395 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Usp40Q8BWR4 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Usp40Q8BWR4 Tcp10c-201ENSMUST00000097403 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Usp40Q8BWR4 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Usp40Q8BWR4 Gm6679-201ENSMUST00000191467 1869 ntBASIC9.85□□□□□ -0.83
Usp40Q8BWR4 Sema6a-206ENSMUST00000135790 4339 ntTSL 5 BASIC9.85□□□□□ -0.83
Usp40Q8BWR4 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Usp40Q8BWR4 Cstf2t-201ENSMUST00000066039 3750 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Usp40Q8BWR4 Gm6117-201ENSMUST00000150540 1333 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Usp40Q8BWR4 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Usp40Q8BWR4 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Usp40Q8BWR4 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Usp40Q8BWR4 Gm973-201ENSMUST00000114243 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Usp40Q8BWR4 Kcnj15-201ENSMUST00000037154 5089 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Usp40Q8BWR4 Smad2-201ENSMUST00000025453 2410 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Usp40Q8BWR4 CR974429.2-201ENSMUST00000221883 1696 ntBASIC9.84□□□□□ -0.83
Usp40Q8BWR4 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Usp40Q8BWR4 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Usp40Q8BWR4 Gm44130-201ENSMUST00000205157 3004 ntBASIC9.84□□□□□ -0.83
Usp40Q8BWR4 Gm37496-201ENSMUST00000191930 2509 ntBASIC9.84□□□□□ -0.83
Usp40Q8BWR4 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Usp40Q8BWR4 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Usp40Q8BWR4 Gm14729-201ENSMUST00000118373 689 ntBASIC9.84□□□□□ -0.83
Usp40Q8BWR4 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC9.84□□□□□ -0.83
Usp40Q8BWR4 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Usp40Q8BWR4 Gm10364-202ENSMUST00000153034 1001 ntBASIC9.84□□□□□ -0.83
Usp40Q8BWR4 Gm25395-201ENSMUST00000157343 272 ntBASIC9.84□□□□□ -0.83
Usp40Q8BWR4 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Usp40Q8BWR4 Gm9359-201ENSMUST00000163721 1221 ntBASIC9.84□□□□□ -0.83
Usp40Q8BWR4 Gm27018-201ENSMUST00000181136 225 ntBASIC9.84□□□□□ -0.83
Usp40Q8BWR4 Gm8609-201ENSMUST00000182967 998 ntBASIC9.84□□□□□ -0.83
Usp40Q8BWR4 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC9.84□□□□□ -0.83
Usp40Q8BWR4 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC9.84□□□□□ -0.83
Usp40Q8BWR4 Gm42584-201ENSMUST00000201404 220 ntBASIC9.84□□□□□ -0.83
Usp40Q8BWR4 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC9.84□□□□□ -0.83
Usp40Q8BWR4 Gm44565-201ENSMUST00000208194 269 ntBASIC9.84□□□□□ -0.83
Usp40Q8BWR4 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC9.84□□□□□ -0.83
Usp40Q8BWR4 AC123533.2-201ENSMUST00000228176 375 ntBASIC9.84□□□□□ -0.83
Usp40Q8BWR4 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Usp40Q8BWR4 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC9.84□□□□□ -0.83
Usp40Q8BWR4 Sult2a3-201ENSMUST00000098809 1018 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Usp40Q8BWR4 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC9.84□□□□□ -0.83
Usp40Q8BWR4 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Usp40Q8BWR4 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Usp40Q8BWR4 Edar-201ENSMUST00000003312 3637 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Usp40Q8BWR4 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Usp40Q8BWR4 Zfp831-201ENSMUST00000059452 9807 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Usp40Q8BWR4 Gpbp1l1-202ENSMUST00000106475 2642 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Usp40Q8BWR4 Card6-201ENSMUST00000118365 5995 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.84
Usp40Q8BWR4 Gm6878-201ENSMUST00000100448 2018 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Usp40Q8BWR4 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Usp40Q8BWR4 Sorbs1-202ENSMUST00000099467 2817 ntAPPRIS P4 TSL 5 BASIC9.83□□□□□ -0.84
Usp40Q8BWR4 Zfp939-202ENSMUST00000186855 2480 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Usp40Q8BWR4 Abcc9-202ENSMUST00000087527 6213 ntAPPRIS P5 TSL 1 (best) BASIC9.83□□□□□ -0.84
Usp40Q8BWR4 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC9.83□□□□□ -0.84
Usp40Q8BWR4 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Usp40Q8BWR4 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Usp40Q8BWR4 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Usp40Q8BWR4 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Usp40Q8BWR4 Zfp661-203ENSMUST00000110368 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Usp40Q8BWR4 Tssc1-206ENSMUST00000221877 4091 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Usp40Q8BWR4 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC9.83□□□□□ -0.84
Usp40Q8BWR4 Mir697-201ENSMUST00000102316 109 ntBASIC9.83□□□□□ -0.84
Usp40Q8BWR4 Gm13732-201ENSMUST00000117753 535 ntBASIC9.83□□□□□ -0.84
Usp40Q8BWR4 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC9.83□□□□□ -0.84
Usp40Q8BWR4 Gm6987-201ENSMUST00000119319 428 ntBASIC9.83□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms