Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm45407-201ENSMUST00000209499 3676 ntBASIC8.32□□□□□ -1.08
Nup98Q6PFD9 Tgm3-201ENSMUST00000110299 4135 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Nup98Q6PFD9 Cldn2-201ENSMUST00000054889 3044 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Nup98Q6PFD9 Gm45297-201ENSMUST00000209893 3483 ntBASIC8.32□□□□□ -1.08
Nup98Q6PFD9 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Nup98Q6PFD9 Ttc37-201ENSMUST00000091466 5381 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Nup98Q6PFD9 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Nup98Q6PFD9 AI427809-203ENSMUST00000123127 2033 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Nup98Q6PFD9 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Nup98Q6PFD9 Gm4956-202ENSMUST00000178869 672 ntBASIC8.31□□□□□ -1.08
Nup98Q6PFD9 Gm8183-201ENSMUST00000183134 980 ntBASIC8.31□□□□□ -1.08
Nup98Q6PFD9 Gm37383-201ENSMUST00000191750 745 ntBASIC8.31□□□□□ -1.08
Nup98Q6PFD9 Gm44823-201ENSMUST00000204775 1107 ntBASIC8.31□□□□□ -1.08
Nup98Q6PFD9 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC8.31□□□□□ -1.08
Nup98Q6PFD9 AC174082.2-201ENSMUST00000222094 543 ntBASIC8.31□□□□□ -1.08
Nup98Q6PFD9 Gm2139-201ENSMUST00000222569 1075 ntBASIC8.31□□□□□ -1.08
Nup98Q6PFD9 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Nup98Q6PFD9 Rasef-202ENSMUST00000102837 5158 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Nup98Q6PFD9 Dcdc2a-202ENSMUST00000069614 6634 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Nup98Q6PFD9 Adgrl2-214ENSMUST00000199238 4670 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Nup98Q6PFD9 Fam19a1-201ENSMUST00000075080 2411 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Nup98Q6PFD9 Dlgap2-201ENSMUST00000043279 3580 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Nup98Q6PFD9 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Nup98Q6PFD9 Stat2-201ENSMUST00000085708 4394 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Nup98Q6PFD9 Rgr-201ENSMUST00000022338 4240 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Nup98Q6PFD9 Gm42898-201ENSMUST00000200370 3073 ntBASIC8.31□□□□□ -1.08
Nup98Q6PFD9 Gm8844-201ENSMUST00000119460 2614 ntBASIC8.31□□□□□ -1.08
Nup98Q6PFD9 Gm9226-201ENSMUST00000188352 3489 ntBASIC8.31□□□□□ -1.08
Nup98Q6PFD9 Gm21152-201ENSMUST00000190271 3483 ntBASIC8.31□□□□□ -1.08
Nup98Q6PFD9 Pinc-201ENSMUST00000190229 2170 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Nup98Q6PFD9 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Nup98Q6PFD9 Helz2-203ENSMUST00000121484 10063 ntTSL 5 BASIC8.31□□□□□ -1.08
Nup98Q6PFD9 Gm37321-201ENSMUST00000195742 1872 ntBASIC8.31□□□□□ -1.08
Nup98Q6PFD9 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Nup98Q6PFD9 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Nup98Q6PFD9 Gm2229-201ENSMUST00000193328 710 ntBASIC8.31□□□□□ -1.08
Nup98Q6PFD9 AL929555.1-201ENSMUST00000215283 509 ntBASIC8.31□□□□□ -1.08
Nup98Q6PFD9 Gm46203-201ENSMUST00000218130 478 ntBASIC8.31□□□□□ -1.08
Nup98Q6PFD9 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Nup98Q6PFD9 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Nup98Q6PFD9 Gm37633-201ENSMUST00000192858 2700 ntBASIC8.31□□□□□ -1.08
Nup98Q6PFD9 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC8.31□□□□□ -1.08
Nup98Q6PFD9 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Nup98Q6PFD9 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
Nup98Q6PFD9 Map2-207ENSMUST00000114018 5303 ntAPPRIS P3 TSL 5 BASIC8.31□□□□□ -1.08
Nup98Q6PFD9 Greb1-201ENSMUST00000048064 7940 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Nup98Q6PFD9 Cdip1-201ENSMUST00000004173 3953 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Nup98Q6PFD9 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Nup98Q6PFD9 C130071C03Rik-201ENSMUST00000131907 3590 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Nup98Q6PFD9 AC161247.1-201ENSMUST00000217744 2295 ntBASIC8.3□□□□□ -1.08
Nup98Q6PFD9 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Nup98Q6PFD9 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Nup98Q6PFD9 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Nup98Q6PFD9 Gm43873-201ENSMUST00000204505 3938 ntBASIC8.3□□□□□ -1.08
Nup98Q6PFD9 Med12-202ENSMUST00000087956 6746 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Nup98Q6PFD9 Tma16-201ENSMUST00000026681 4328 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Nup98Q6PFD9 Siae-204ENSMUST00000215474 4947 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Nup98Q6PFD9 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Nup98Q6PFD9 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Nup98Q6PFD9 Fam160a2-208ENSMUST00000179474 10853 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Nup98Q6PFD9 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC8.3□□□□□ -1.08
Nup98Q6PFD9 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Nup98Q6PFD9 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Nup98Q6PFD9 Odf2-206ENSMUST00000113759 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Nup98Q6PFD9 Gm15712-201ENSMUST00000120369 1156 ntBASIC8.3□□□□□ -1.08
Nup98Q6PFD9 Ino80c-202ENSMUST00000125169 756 ntTSL 3 BASIC8.3□□□□□ -1.08
Nup98Q6PFD9 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Nup98Q6PFD9 Gm24781-201ENSMUST00000157636 117 ntBASIC8.3□□□□□ -1.08
Nup98Q6PFD9 Gm43141-201ENSMUST00000199695 274 ntBASIC8.3□□□□□ -1.08
Nup98Q6PFD9 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC8.3□□□□□ -1.08
Nup98Q6PFD9 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC8.3□□□□□ -1.08
Nup98Q6PFD9 Gm45394-201ENSMUST00000209240 1175 ntBASIC8.3□□□□□ -1.08
Nup98Q6PFD9 Gm9535-201ENSMUST00000218499 768 ntBASIC8.3□□□□□ -1.08
Nup98Q6PFD9 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Nup98Q6PFD9 Olfr324-203ENSMUST00000216965 3691 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Nup98Q6PFD9 Gm43128-201ENSMUST00000202212 1621 ntBASIC8.3□□□□□ -1.08
Nup98Q6PFD9 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Nup98Q6PFD9 AC153564.1-201ENSMUST00000217771 3607 ntTSL 5 BASIC8.3□□□□□ -1.08
Nup98Q6PFD9 Rai14-201ENSMUST00000090339 4909 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Nup98Q6PFD9 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Nup98Q6PFD9 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Nup98Q6PFD9 Gm14615-201ENSMUST00000117575 1816 ntBASIC8.3□□□□□ -1.08
Nup98Q6PFD9 Cers4-201ENSMUST00000008350 9475 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Nup98Q6PFD9 Gm19410-201ENSMUST00000207505 6352 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Nup98Q6PFD9 Dph6-202ENSMUST00000055144 2476 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Nup98Q6PFD9 Rora-201ENSMUST00000034766 10878 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Nup98Q6PFD9 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Nup98Q6PFD9 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC8.3□□□□□ -1.08
Nup98Q6PFD9 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Nup98Q6PFD9 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC8.29□□□□□ -1.08
Nup98Q6PFD9 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Nup98Q6PFD9 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC8.29□□□□□ -1.08
Nup98Q6PFD9 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Nup98Q6PFD9 Olfr77-201ENSMUST00000057596 9649 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Nup98Q6PFD9 Gm23768-201ENSMUST00000104440 131 ntBASIC8.29□□□□□ -1.08
Nup98Q6PFD9 Gm28929-201ENSMUST00000185330 1193 ntBASIC8.29□□□□□ -1.08
Nup98Q6PFD9 Gm10416-201ENSMUST00000197379 645 ntBASIC8.29□□□□□ -1.08
Nup98Q6PFD9 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Nup98Q6PFD9 Olfr633-201ENSMUST00000098188 939 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Nup98Q6PFD9 Pwp2-201ENSMUST00000042556 3872 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms