Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Mir7b-201ENSMUST00000083557 111 ntBASIC9.49□□□□□ -0.89
Usp48Q3V0C5 Gm6999-201ENSMUST00000180427 2658 ntTSL 2 BASIC9.49□□□□□ -0.89
Usp48Q3V0C5 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Usp48Q3V0C5 Lepr-201ENSMUST00000037552 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Usp48Q3V0C5 Gm17229-202ENSMUST00000166792 1753 ntBASIC9.49□□□□□ -0.89
Usp48Q3V0C5 Gm37303-201ENSMUST00000194202 1559 ntBASIC9.49□□□□□ -0.89
Usp48Q3V0C5 Etv5-203ENSMUST00000168774 3773 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Usp48Q3V0C5 Pcbp2-202ENSMUST00000078404 2829 ntTSL 2 BASIC9.49□□□□□ -0.89
Usp48Q3V0C5 Slc38a1-202ENSMUST00000088454 7059 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Usp48Q3V0C5 Gm42972-201ENSMUST00000196937 5617 ntBASIC9.49□□□□□ -0.89
Usp48Q3V0C5 Pbdc1-201ENSMUST00000033577 2638 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Usp48Q3V0C5 B3gnt2-201ENSMUST00000055549 2602 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Usp48Q3V0C5 Cdh23-201ENSMUST00000073242 10688 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Usp48Q3V0C5 2310015D24Rik-202ENSMUST00000187920 2917 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Usp48Q3V0C5 Pik3r4-201ENSMUST00000065778 4711 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Usp48Q3V0C5 AC165260.6-204ENSMUST00000225571 3508 ntBASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Slitrk2-202ENSMUST00000166241 7769 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Pan2-203ENSMUST00000218315 4379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Cbx3-204ENSMUST00000114446 1719 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Ggta1-204ENSMUST00000113001 3340 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Gm8107-201ENSMUST00000117477 2009 ntBASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Mast4-201ENSMUST00000099202 7709 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Sipa1l1-201ENSMUST00000053969 7488 ntAPPRIS P3 TSL 5 BASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Aldoart1-202ENSMUST00000179234 2050 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Unc79-201ENSMUST00000085079 7762 ntAPPRIS ALT2 TSL 2 BASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Gm7821-201ENSMUST00000117111 788 ntBASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Gm13750-201ENSMUST00000117621 465 ntBASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Gm13502-201ENSMUST00000121574 684 ntBASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Gm29513-201ENSMUST00000185741 202 ntBASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Gm37741-201ENSMUST00000191768 1256 ntBASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC9.48□□□□□ -0.89
Usp48Q3V0C5 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC9.48□□□□□ -0.89
Usp48Q3V0C5 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Gm18748-201ENSMUST00000198507 622 ntBASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Gm35570-201ENSMUST00000198730 681 ntBASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Gm8479-201ENSMUST00000203825 718 ntBASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Gm19065-202ENSMUST00000203910 1165 ntBASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Gm45198-201ENSMUST00000206796 591 ntBASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Gm44688-201ENSMUST00000209083 537 ntBASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Gm7419-201ENSMUST00000209962 925 ntBASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Gm45299-201ENSMUST00000210199 420 ntBASIC9.48□□□□□ -0.89
Usp48Q3V0C5 AC140409.4-201ENSMUST00000215757 538 ntBASIC9.48□□□□□ -0.89
Usp48Q3V0C5 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC9.48□□□□□ -0.89
Usp48Q3V0C5 AC153526.1-201ENSMUST00000219750 190 ntBASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Gm19340-201ENSMUST00000221995 345 ntBASIC9.48□□□□□ -0.89
Usp48Q3V0C5 AC241621.1-201ENSMUST00000224499 430 ntBASIC9.48□□□□□ -0.89
Usp48Q3V0C5 AC165281.1-201ENSMUST00000225713 1011 ntBASIC9.48□□□□□ -0.89
Usp48Q3V0C5 AC136376.1-201ENSMUST00000228496 950 ntBASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Olfr458-201ENSMUST00000090156 942 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Rnf213-203ENSMUST00000172235 2422 ntTSL 5 BASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Gm2163-201ENSMUST00000179734 2723 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Commd8-201ENSMUST00000013693 3895 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Zfp780b-203ENSMUST00000205874 1907 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Mrpl35-201ENSMUST00000065103 3721 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Muc5ac-203ENSMUST00000163321 8505 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Usp48Q3V0C5 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Tbc1d24-216ENSMUST00000202925 4216 ntTSL 5 BASIC9.48□□□□□ -0.89
Usp48Q3V0C5 AC153548.1-201ENSMUST00000219283 2661 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Vmn2r40-201ENSMUST00000171942 3623 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Gm26920-201ENSMUST00000182746 2374 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
Usp48Q3V0C5 Smarcal1-201ENSMUST00000047615 3059 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Usp48Q3V0C5 Rps20-203ENSMUST00000138502 3706 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Usp48Q3V0C5 Acad11-201ENSMUST00000047799 3444 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Usp48Q3V0C5 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Usp48Q3V0C5 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Usp48Q3V0C5 9330102E08Rik-201ENSMUST00000204642 3843 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Usp48Q3V0C5 Gm7972-203ENSMUST00000209180 2184 ntTSL 3 BASIC9.47□□□□□ -0.89
Usp48Q3V0C5 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC9.47□□□□□ -0.89
Usp48Q3V0C5 Trim2-206ENSMUST00000107695 7200 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Usp48Q3V0C5 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Usp48Q3V0C5 Sult2a7-201ENSMUST00000108524 897 ntAPPRIS P2 TSL 5 BASIC9.47□□□□□ -0.89
Usp48Q3V0C5 Rnf170-203ENSMUST00000110575 966 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Usp48Q3V0C5 Gm15754-201ENSMUST00000119191 478 ntBASIC9.47□□□□□ -0.89
Usp48Q3V0C5 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC9.47□□□□□ -0.89
Usp48Q3V0C5 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Usp48Q3V0C5 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC9.47□□□□□ -0.89
Usp48Q3V0C5 Gm24685-201ENSMUST00000157764 285 ntBASIC9.47□□□□□ -0.89
Usp48Q3V0C5 Gm16563-201ENSMUST00000162673 423 ntBASIC9.47□□□□□ -0.89
Usp48Q3V0C5 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Usp48Q3V0C5 Gm20396-201ENSMUST00000173358 745 ntBASIC9.47□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms