Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm45112-201ENSMUST00000208576 5125 ntBASIC7.57□□□□□ -1.2
Trim43aQ3TL54 Gm4806-201ENSMUST00000222704 1690 ntBASIC7.57□□□□□ -1.2
Trim43aQ3TL54 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Trim43aQ3TL54 Pdgfd-203ENSMUST00000214892 2862 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Trim43aQ3TL54 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim43aQ3TL54 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim43aQ3TL54 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim43aQ3TL54 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim43aQ3TL54 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Trim43aQ3TL54 AC156163.1-201ENSMUST00000215598 3369 ntBASIC7.56□□□□□ -1.2
Trim43aQ3TL54 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC7.56□□□□□ -1.2
Trim43aQ3TL54 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Trim43aQ3TL54 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Trim43aQ3TL54 Cav1-205ENSMUST00000115456 995 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
Trim43aQ3TL54 Gm14158-201ENSMUST00000118409 308 ntBASIC7.56□□□□□ -1.2
Trim43aQ3TL54 Gm11928-201ENSMUST00000119323 437 ntBASIC7.56□□□□□ -1.2
Trim43aQ3TL54 Gm13988-201ENSMUST00000119363 288 ntBASIC7.56□□□□□ -1.2
Trim43aQ3TL54 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC7.56□□□□□ -1.2
Trim43aQ3TL54 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC7.56□□□□□ -1.2
Trim43aQ3TL54 Gm14024-201ENSMUST00000141964 560 ntTSL 2 BASIC7.56□□□□□ -1.2
Trim43aQ3TL54 Gm23027-201ENSMUST00000158771 158 ntBASIC7.56□□□□□ -1.2
Trim43aQ3TL54 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Trim43aQ3TL54 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Trim43aQ3TL54 Trav7n-6-201ENSMUST00000178100 381 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Trim43aQ3TL54 Gm6176-201ENSMUST00000178209 906 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Trim43aQ3TL54 Gm4567-201ENSMUST00000178591 906 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Trim43aQ3TL54 Gm10668-201ENSMUST00000179491 906 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Trim43aQ3TL54 Mir8095-201ENSMUST00000185103 129 ntBASIC7.56□□□□□ -1.2
Trim43aQ3TL54 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC7.56□□□□□ -1.2
Trim43aQ3TL54 Gm4545-201ENSMUST00000190797 603 ntBASIC7.56□□□□□ -1.2
Trim43aQ3TL54 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC7.56□□□□□ -1.2
Trim43aQ3TL54 Gm37585-201ENSMUST00000195440 280 ntBASIC7.56□□□□□ -1.2
Trim43aQ3TL54 Hax1-204ENSMUST00000197725 648 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Trim43aQ3TL54 Klra13-ps-203ENSMUST00000204367 850 ntBASIC7.56□□□□□ -1.2
Trim43aQ3TL54 Cd69-203ENSMUST00000204411 560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim43aQ3TL54 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC7.56□□□□□ -1.2
Trim43aQ3TL54 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim43aQ3TL54 Gm2840-201ENSMUST00000048361 411 ntBASIC7.56□□□□□ -1.2
Trim43aQ3TL54 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Trim43aQ3TL54 Gm16020-201ENSMUST00000084281 210 ntBASIC7.56□□□□□ -1.2
Trim43aQ3TL54 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim43aQ3TL54 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Trim43aQ3TL54 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim43aQ3TL54 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC7.56□□□□□ -1.2
Trim43aQ3TL54 Gm6356-201ENSMUST00000166618 1757 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Trim43aQ3TL54 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim43aQ3TL54 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC7.56□□□□□ -1.2
Trim43aQ3TL54 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC7.56□□□□□ -1.2
Trim43aQ3TL54 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Trim43aQ3TL54 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim43aQ3TL54 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim43aQ3TL54 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim43aQ3TL54 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Trim43aQ3TL54 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC7.55□□□□□ -1.2
Trim43aQ3TL54 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trim43aQ3TL54 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Trim43aQ3TL54 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Trim43aQ3TL54 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC7.55□□□□□ -1.2
Trim43aQ3TL54 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC7.55□□□□□ -1.2
Trim43aQ3TL54 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trim43aQ3TL54 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Trim43aQ3TL54 Gykl1-201ENSMUST00000066193 1990 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Trim43aQ3TL54 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Trim43aQ3TL54 Gm20121-201ENSMUST00000198547 1594 ntBASIC7.55□□□□□ -1.2
Trim43aQ3TL54 Gm39321-203ENSMUST00000217090 1575 ntTSL 5 BASIC7.55□□□□□ -1.2
Trim43aQ3TL54 Gm37525-201ENSMUST00000193499 2871 ntBASIC7.55□□□□□ -1.2
Trim43aQ3TL54 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Trim43aQ3TL54 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Trim43aQ3TL54 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trim43aQ3TL54 Gm9585-201ENSMUST00000219681 1404 ntBASIC7.55□□□□□ -1.2
Trim43aQ3TL54 Gm38120-201ENSMUST00000195506 4642 ntBASIC7.55□□□□□ -1.2
Trim43aQ3TL54 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trim43aQ3TL54 Gm45250-201ENSMUST00000209414 3592 ntBASIC7.55□□□□□ -1.2
Trim43aQ3TL54 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Trim43aQ3TL54 Amelx-203ENSMUST00000112119 841 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
Trim43aQ3TL54 Cldn16-201ENSMUST00000115302 950 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trim43aQ3TL54 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Trim43aQ3TL54 Gm24883-201ENSMUST00000158391 281 ntBASIC7.55□□□□□ -1.2
Trim43aQ3TL54 Dctd-205ENSMUST00000174278 799 ntAPPRIS P1 TSL 3 BASIC7.55□□□□□ -1.2
Trim43aQ3TL54 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC7.55□□□□□ -1.2
Trim43aQ3TL54 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC7.55□□□□□ -1.2
Trim43aQ3TL54 Gm27617-201ENSMUST00000184321 168 ntBASIC7.55□□□□□ -1.2
Trim43aQ3TL54 Gm28164-201ENSMUST00000190143 442 ntBASIC7.55□□□□□ -1.2
Trim43aQ3TL54 Gm38022-201ENSMUST00000191762 403 ntBASIC7.55□□□□□ -1.2
Trim43aQ3TL54 Gm37729-201ENSMUST00000194761 1172 ntBASIC7.55□□□□□ -1.2
Trim43aQ3TL54 1700021F02Rik-201ENSMUST00000197576 350 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Trim43aQ3TL54 Gm9710-201ENSMUST00000198053 499 ntBASIC7.55□□□□□ -1.2
Trim43aQ3TL54 Scn8a-207ENSMUST00000200959 587 ntTSL 3 BASIC7.55□□□□□ -1.2
Trim43aQ3TL54 Gm44448-201ENSMUST00000205104 393 ntTSL 5 BASIC7.55□□□□□ -1.2
Trim43aQ3TL54 Gm33248-201ENSMUST00000205836 617 ntTSL 3 BASIC7.55□□□□□ -1.2
Trim43aQ3TL54 Olfr1294-201ENSMUST00000208334 942 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Trim43aQ3TL54 Akr1c12-201ENSMUST00000021632 1261 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trim43aQ3TL54 AC126939.4-201ENSMUST00000225360 743 ntBASIC7.55□□□□□ -1.2
Trim43aQ3TL54 AC161537.1-202ENSMUST00000228450 868 ntBASIC7.55□□□□□ -1.2
Trim43aQ3TL54 Tmem213-201ENSMUST00000031851 631 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trim43aQ3TL54 Defa37-201ENSMUST00000084040 403 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trim43aQ3TL54 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Trim43aQ3TL54 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trim43aQ3TL54 Csnk1g1-204ENSMUST00000130798 1648 ntTSL 5 BASIC7.55□□□□□ -1.2
Trim43aQ3TL54 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms