Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Hmgb1P63158 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Hmgb1P63158 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC8.27□□□□□ -1.09
Hmgb1P63158 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Hmgb1P63158 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC8.26□□□□□ -1.09
Hmgb1P63158 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Hmgb1P63158 Gm6818-201ENSMUST00000190556 2558 ntBASIC8.26□□□□□ -1.09
Hmgb1P63158 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Hmgb1P63158 Enox2-204ENSMUST00000114914 3936 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Hmgb1P63158 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
Hmgb1P63158 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Hmgb1P63158 Gm8844-201ENSMUST00000119460 2614 ntBASIC8.26□□□□□ -1.09
Hmgb1P63158 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Hmgb1P63158 Gm26831-201ENSMUST00000181458 1380 ntBASIC8.26□□□□□ -1.09
Hmgb1P63158 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Hmgb1P63158 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC8.26□□□□□ -1.09
Hmgb1P63158 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Hmgb1P63158 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Hmgb1P63158 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Hmgb1P63158 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Hmgb1P63158 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Hmgb1P63158 Pilrb1-201ENSMUST00000110978 1020 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Hmgb1P63158 Gm11866-201ENSMUST00000120209 335 ntBASIC8.26□□□□□ -1.09
Hmgb1P63158 Gm12593-201ENSMUST00000120981 743 ntBASIC8.26□□□□□ -1.09
Hmgb1P63158 Gm16523-201ENSMUST00000121253 592 ntBASIC8.26□□□□□ -1.09
Hmgb1P63158 1700125H03Rik-202ENSMUST00000139265 637 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Hmgb1P63158 Pabpn1-203ENSMUST00000139985 903 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
Hmgb1P63158 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Hmgb1P63158 Gm10680-201ENSMUST00000156612 702 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Hmgb1P63158 Gm23497-201ENSMUST00000157738 130 ntBASIC8.26□□□□□ -1.09
Hmgb1P63158 Gm26167-201ENSMUST00000158423 253 ntBASIC8.26□□□□□ -1.09
Hmgb1P63158 Gm20702-201ENSMUST00000176181 460 ntBASIC8.26□□□□□ -1.09
Hmgb1P63158 4930426I24Rik-201ENSMUST00000180709 601 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Hmgb1P63158 Mir6340-201ENSMUST00000183857 119 ntBASIC8.26□□□□□ -1.09
Hmgb1P63158 1700003L19Rik-201ENSMUST00000190074 746 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Hmgb1P63158 Gm42424-201ENSMUST00000198319 376 ntBASIC8.26□□□□□ -1.09
Hmgb1P63158 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC8.26□□□□□ -1.09
Hmgb1P63158 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC8.26□□□□□ -1.09
Hmgb1P63158 Gm44508-201ENSMUST00000206943 1157 ntBASIC8.26□□□□□ -1.09
Hmgb1P63158 Gm44691-201ENSMUST00000207562 324 ntTSL 5 BASIC8.26□□□□□ -1.09
Hmgb1P63158 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC8.26□□□□□ -1.09
Hmgb1P63158 Gm34597-201ENSMUST00000211189 633 ntTSL 5 BASIC8.26□□□□□ -1.09
Hmgb1P63158 Gm3776-201ENSMUST00000217203 874 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Hmgb1P63158 Gm2915-201ENSMUST00000222565 787 ntBASIC8.26□□□□□ -1.09
Hmgb1P63158 AC069562.1-201ENSMUST00000224206 434 ntBASIC8.26□□□□□ -1.09
Hmgb1P63158 AC164597.1-201ENSMUST00000226538 514 ntBASIC8.26□□□□□ -1.09
Hmgb1P63158 AC122309.1-201ENSMUST00000226945 421 ntBASIC8.26□□□□□ -1.09
Hmgb1P63158 Hpf1-201ENSMUST00000037190 1191 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Hmgb1P63158 Cutal-202ENSMUST00000047447 1054 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Hmgb1P63158 Olfr432-201ENSMUST00000062665 939 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Hmgb1P63158 Lyrm2-201ENSMUST00000062802 465 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Hmgb1P63158 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Hmgb1P63158 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Hmgb1P63158 Gm10805-201ENSMUST00000099710 399 ntBASIC8.26□□□□□ -1.09
Hmgb1P63158 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Hmgb1P63158 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC8.26□□□□□ -1.09
Hmgb1P63158 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC8.26□□□□□ -1.09
Hmgb1P63158 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
Hmgb1P63158 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Hmgb1P63158 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Hmgb1P63158 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Hmgb1P63158 Camk2d-205ENSMUST00000106401 3059 ntTSL 5 BASIC8.26□□□□□ -1.09
Hmgb1P63158 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Hmgb1P63158 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Hmgb1P63158 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Hmgb1P63158 Gm13821-201ENSMUST00000202029 3201 ntBASIC8.25□□□□□ -1.09
Hmgb1P63158 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb1P63158 Ggta1-205ENSMUST00000113002 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb1P63158 Stx8-202ENSMUST00000021286 1638 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb1P63158 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb1P63158 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Hmgb1P63158 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb1P63158 Gm38325-201ENSMUST00000194507 1377 ntBASIC8.25□□□□□ -1.09
Hmgb1P63158 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb1P63158 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb1P63158 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Hmgb1P63158 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb1P63158 Cyp4a30b-201ENSMUST00000119958 1527 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Hmgb1P63158 Adgrv1-202ENSMUST00000109565 7094 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb1P63158 Gm43386-201ENSMUST00000199654 4001 ntBASIC8.25□□□□□ -1.09
Hmgb1P63158 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Hmgb1P63158 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb1P63158 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Hmgb1P63158 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb1P63158 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb1P63158 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Hmgb1P63158 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb1P63158 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb1P63158 Rgs8-204ENSMUST00000111814 678 ntTSL 3 BASIC8.25□□□□□ -1.09
Hmgb1P63158 Lipo4-201ENSMUST00000112511 1188 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Hmgb1P63158 Gm13313-201ENSMUST00000118938 1084 ntBASIC8.25□□□□□ -1.09
Hmgb1P63158 Gm14830-201ENSMUST00000121899 700 ntBASIC8.25□□□□□ -1.09
Hmgb1P63158 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC8.25□□□□□ -1.09
Hmgb1P63158 Banf2os-202ENSMUST00000145504 386 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb1P63158 Gm16107-201ENSMUST00000162523 862 ntBASIC8.25□□□□□ -1.09
Hmgb1P63158 Gm4340-201ENSMUST00000163113 807 ntAPPRIS ALT2 BASIC8.25□□□□□ -1.09
Hmgb1P63158 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb1P63158 Svs5-201ENSMUST00000017148 628 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb1P63158 Gm4246-201ENSMUST00000172822 216 ntBASIC8.25□□□□□ -1.09
Hmgb1P63158 Gm15251-201ENSMUST00000177947 883 ntBASIC8.25□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 111.8 ms