Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Shmt1P50431 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC7.68□□□□□ -1.18
Shmt1P50431 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Shmt1P50431 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
Shmt1P50431 Adcy10-202ENSMUST00000111439 5193 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
Shmt1P50431 A730049H05Rik-201ENSMUST00000057977 2239 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Shmt1P50431 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Shmt1P50431 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
Shmt1P50431 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Shmt1P50431 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Shmt1P50431 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Shmt1P50431 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Shmt1P50431 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Shmt1P50431 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Shmt1P50431 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Shmt1P50431 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
Shmt1P50431 Cyfip1-203ENSMUST00000163845 4178 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Shmt1P50431 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Shmt1P50431 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC7.68□□□□□ -1.18
Shmt1P50431 Gm7571-201ENSMUST00000120252 927 ntBASIC7.68□□□□□ -1.18
Shmt1P50431 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC7.68□□□□□ -1.18
Shmt1P50431 Gm26480-201ENSMUST00000122619 297 ntBASIC7.68□□□□□ -1.18
Shmt1P50431 Gm7420-201ENSMUST00000162836 842 ntBASIC7.68□□□□□ -1.18
Shmt1P50431 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Shmt1P50431 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC7.68□□□□□ -1.18
Shmt1P50431 Obox4-ps31-201ENSMUST00000177210 1137 ntBASIC7.68□□□□□ -1.18
Shmt1P50431 Rd3l-204ENSMUST00000190536 1242 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Shmt1P50431 4930565D16Rik-201ENSMUST00000192777 1112 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Shmt1P50431 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC7.68□□□□□ -1.18
Shmt1P50431 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC7.68□□□□□ -1.18
Shmt1P50431 Gm45525-201ENSMUST00000210800 389 ntBASIC7.68□□□□□ -1.18
Shmt1P50431 Gm18860-201ENSMUST00000212029 764 ntBASIC7.68□□□□□ -1.18
Shmt1P50431 Gm8058-201ENSMUST00000217247 587 ntBASIC7.68□□□□□ -1.18
Shmt1P50431 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC7.68□□□□□ -1.18
Shmt1P50431 AL837512.1-201ENSMUST00000223914 1073 ntBASIC7.68□□□□□ -1.18
Shmt1P50431 AC122397.3-201ENSMUST00000227097 527 ntBASIC7.68□□□□□ -1.18
Shmt1P50431 Olfr1509-201ENSMUST00000045066 1010 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Shmt1P50431 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Shmt1P50431 Gm6419-201ENSMUST00000097166 429 ntBASIC7.68□□□□□ -1.18
Shmt1P50431 Olfr1044-201ENSMUST00000099906 945 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Shmt1P50431 Aspa-206ENSMUST00000184572 1746 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Shmt1P50431 Meiob-201ENSMUST00000024972 1703 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Shmt1P50431 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Shmt1P50431 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC7.68□□□□□ -1.18
Shmt1P50431 Gm38368-201ENSMUST00000193181 1335 ntBASIC7.68□□□□□ -1.18
Shmt1P50431 Gm45017-201ENSMUST00000206842 1777 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Shmt1P50431 Ccnb2-ps-202ENSMUST00000170898 2296 ntBASIC7.68□□□□□ -1.18
Shmt1P50431 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
Shmt1P50431 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Shmt1P50431 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC7.68□□□□□ -1.18
Shmt1P50431 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Shmt1P50431 Gm19801-201ENSMUST00000218231 1882 ntBASIC7.68□□□□□ -1.18
Shmt1P50431 Ncoa6-202ENSMUST00000109669 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Shmt1P50431 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Shmt1P50431 Nlrc5-201ENSMUST00000053085 6945 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Shmt1P50431 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC7.68□□□□□ -1.18
Shmt1P50431 Olfr12-202ENSMUST00000213247 4158 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Shmt1P50431 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Shmt1P50431 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Shmt1P50431 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Shmt1P50431 CT025642.2-201ENSMUST00000225009 1649 ntBASIC7.67□□□□□ -1.18
Shmt1P50431 Gm29226-201ENSMUST00000186871 2167 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Shmt1P50431 AC122356.1-202ENSMUST00000227328 2758 ntBASIC7.67□□□□□ -1.18
Shmt1P50431 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Shmt1P50431 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Shmt1P50431 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Shmt1P50431 B930025P03Rik-201ENSMUST00000207718 3085 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Shmt1P50431 Liph-201ENSMUST00000060673 3793 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Shmt1P50431 Gm10401-201ENSMUST00000100848 607 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Shmt1P50431 Gm13768-201ENSMUST00000116469 929 ntBASIC7.67□□□□□ -1.18
Shmt1P50431 Gm13352-201ENSMUST00000117515 262 ntBASIC7.67□□□□□ -1.18
Shmt1P50431 Gm12944-201ENSMUST00000119262 463 ntBASIC7.67□□□□□ -1.18
Shmt1P50431 Gm7113-201ENSMUST00000120477 958 ntBASIC7.67□□□□□ -1.18
Shmt1P50431 Gm12321-201ENSMUST00000121485 804 ntBASIC7.67□□□□□ -1.18
Shmt1P50431 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Shmt1P50431 4930445N08Rik-201ENSMUST00000156925 313 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Shmt1P50431 Gm7244-201ENSMUST00000164658 455 ntBASIC7.67□□□□□ -1.18
Shmt1P50431 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Shmt1P50431 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Shmt1P50431 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Shmt1P50431 Gm21839-201ENSMUST00000179536 378 ntBASIC7.67□□□□□ -1.18
Shmt1P50431 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Shmt1P50431 Mir6357-201ENSMUST00000184246 104 ntBASIC7.67□□□□□ -1.18
Shmt1P50431 Mir6987-201ENSMUST00000184789 73 ntBASIC7.67□□□□□ -1.18
Shmt1P50431 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC7.67□□□□□ -1.18
Shmt1P50431 Gm8101-201ENSMUST00000192796 478 ntBASIC7.67□□□□□ -1.18
Shmt1P50431 Gm43147-201ENSMUST00000196944 542 ntBASIC7.67□□□□□ -1.18
Shmt1P50431 Ighv1-73-201ENSMUST00000197435 352 ntBASIC7.67□□□□□ -1.18
Shmt1P50431 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC7.67□□□□□ -1.18
Shmt1P50431 Gm44566-201ENSMUST00000207638 304 ntBASIC7.67□□□□□ -1.18
Shmt1P50431 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Shmt1P50431 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC7.67□□□□□ -1.18
Shmt1P50431 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC7.67□□□□□ -1.18
Shmt1P50431 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC7.67□□□□□ -1.18
Shmt1P50431 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Shmt1P50431 AL591207.2-201ENSMUST00000222991 337 ntBASIC7.67□□□□□ -1.18
Shmt1P50431 AC156574.1-201ENSMUST00000227084 452 ntBASIC7.67□□□□□ -1.18
Shmt1P50431 AC115735.5-201ENSMUST00000228386 397 ntBASIC7.67□□□□□ -1.18
Shmt1P50431 Kcne3-201ENSMUST00000049333 1012 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Shmt1P50431 Olfr683-201ENSMUST00000061284 960 ntBASIC7.67□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms