Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Scgb2b30-201ENSMUST00000187013 336 ntBASIC9□□□□□ -0.97
Rfx1P48377 Gm28212-201ENSMUST00000187114 356 ntTSL 5 BASIC9□□□□□ -0.97
Rfx1P48377 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC9□□□□□ -0.97
Rfx1P48377 Gm29568-201ENSMUST00000187884 356 ntTSL 5 BASIC9□□□□□ -0.97
Rfx1P48377 Gm29080-201ENSMUST00000188565 356 ntTSL 5 BASIC9□□□□□ -0.97
Rfx1P48377 Gm28944-201ENSMUST00000188946 356 ntTSL 5 BASIC9□□□□□ -0.97
Rfx1P48377 Gm28908-201ENSMUST00000189002 356 ntTSL 5 BASIC9□□□□□ -0.97
Rfx1P48377 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC9□□□□□ -0.97
Rfx1P48377 Gm29078-201ENSMUST00000190611 356 ntTSL 5 BASIC9□□□□□ -0.97
Rfx1P48377 Gm29250-201ENSMUST00000191372 368 ntTSL 5 BASIC9□□□□□ -0.97
Rfx1P48377 Scgb2b10-201ENSMUST00000191403 318 ntBASIC9□□□□□ -0.97
Rfx1P48377 Gm37560-201ENSMUST00000194289 1000 ntBASIC9□□□□□ -0.97
Rfx1P48377 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC9□□□□□ -0.97
Rfx1P48377 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC9□□□□□ -0.97
Rfx1P48377 AC132384.1-201ENSMUST00000219908 1195 ntBASIC9□□□□□ -0.97
Rfx1P48377 AC134439.2-201ENSMUST00000221950 467 ntBASIC9□□□□□ -0.97
Rfx1P48377 Defb3-201ENSMUST00000033852 275 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rfx1P48377 Thyn1-201ENSMUST00000039161 918 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rfx1P48377 Cypt2-201ENSMUST00000041758 697 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rfx1P48377 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC9□□□□□ -0.97
Rfx1P48377 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC9□□□□□ -0.97
Rfx1P48377 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC9□□□□□ -0.97
Rfx1P48377 6330409D20Rik-201ENSMUST00000009695 1119 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rfx1P48377 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC9□□□□□ -0.97
Rfx1P48377 Olfr1226-201ENSMUST00000099790 933 ntAPPRIS P1 BASIC9□□□□□ -0.97
Rfx1P48377 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC9□□□□□ -0.97
Rfx1P48377 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Rfx1P48377 Kbtbd3-202ENSMUST00000212221 2313 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rfx1P48377 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rfx1P48377 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Rfx1P48377 Gm42568-201ENSMUST00000195639 1841 ntBASIC9□□□□□ -0.97
Rfx1P48377 Olfr701-201ENSMUST00000075414 3063 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rfx1P48377 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rfx1P48377 Malat1-201ENSMUST00000172812 6983 ntBASIC9□□□□□ -0.97
Rfx1P48377 4933406K04Rik-203ENSMUST00000135423 1391 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Rfx1P48377 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Rfx1P48377 3110043O21Rik-201ENSMUST00000084724 3413 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Rfx1P48377 Zp4-ps-201ENSMUST00000220980 1561 ntBASIC8.99□□□□□ -0.97
Rfx1P48377 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Rfx1P48377 Gm43425-201ENSMUST00000201793 3291 ntBASIC8.99□□□□□ -0.97
Rfx1P48377 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rfx1P48377 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC8.99□□□□□ -0.97
Rfx1P48377 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rfx1P48377 Gm4961-201ENSMUST00000197982 2249 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Rfx1P48377 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rfx1P48377 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rfx1P48377 Gm24472-201ENSMUST00000104484 132 ntBASIC8.99□□□□□ -0.97
Rfx1P48377 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Rfx1P48377 Odam-201ENSMUST00000113274 872 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rfx1P48377 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC8.99□□□□□ -0.97
Rfx1P48377 Gm14388-201ENSMUST00000118119 477 ntBASIC8.99□□□□□ -0.97
Rfx1P48377 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC8.99□□□□□ -0.97
Rfx1P48377 Gm5883-201ENSMUST00000120735 495 ntBASIC8.99□□□□□ -0.97
Rfx1P48377 Gm11186-201ENSMUST00000137096 1179 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Rfx1P48377 Gm15324-201ENSMUST00000139397 355 ntTSL 2 BASIC8.99□□□□□ -0.97
Rfx1P48377 Gm16184-201ENSMUST00000162324 573 ntBASIC8.99□□□□□ -0.97
Rfx1P48377 Gm16556-201ENSMUST00000162608 471 ntTSL 5 BASIC8.99□□□□□ -0.97
Rfx1P48377 Gm20918-202ENSMUST00000188637 1227 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rfx1P48377 Olfr318-201ENSMUST00000189911 1026 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Rfx1P48377 Gm37716-201ENSMUST00000193553 947 ntBASIC8.99□□□□□ -0.97
Rfx1P48377 Gm37871-201ENSMUST00000194973 688 ntBASIC8.99□□□□□ -0.97
Rfx1P48377 Gm7210-201ENSMUST00000209309 1067 ntBASIC8.99□□□□□ -0.97
Rfx1P48377 Gm17911-201ENSMUST00000210806 877 ntBASIC8.99□□□□□ -0.97
Rfx1P48377 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC8.99□□□□□ -0.97
Rfx1P48377 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC8.99□□□□□ -0.97
Rfx1P48377 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Rfx1P48377 AC156574.1-201ENSMUST00000227084 452 ntBASIC8.99□□□□□ -0.97
Rfx1P48377 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Rfx1P48377 Eif3k-201ENSMUST00000066070 774 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rfx1P48377 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Rfx1P48377 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Rfx1P48377 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rfx1P48377 Dcx-203ENSMUST00000112851 4095 ntAPPRIS ALT1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rfx1P48377 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC8.99□□□□□ -0.97
Rfx1P48377 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rfx1P48377 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC8.99□□□□□ -0.97
Rfx1P48377 Gm37745-201ENSMUST00000193304 8163 ntBASIC8.99□□□□□ -0.97
Rfx1P48377 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC8.99□□□□□ -0.97
Rfx1P48377 CT009757.6-201ENSMUST00000220661 2312 ntBASIC8.99□□□□□ -0.97
Rfx1P48377 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rfx1P48377 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Rfx1P48377 Gm10706-201ENSMUST00000128327 1960 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Rfx1P48377 Gm42973-201ENSMUST00000197913 3200 ntBASIC8.99□□□□□ -0.97
Rfx1P48377 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC8.99□□□□□ -0.97
Rfx1P48377 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Rfx1P48377 AC135119.1-202ENSMUST00000228435 2203 ntBASIC8.99□□□□□ -0.97
Rfx1P48377 Muc5ac-202ENSMUST00000155534 10752 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Rfx1P48377 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Rfx1P48377 Gm6999-201ENSMUST00000180427 2658 ntTSL 2 BASIC8.98□□□□□ -0.97
Rfx1P48377 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rfx1P48377 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rfx1P48377 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rfx1P48377 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC8.98□□□□□ -0.97
Rfx1P48377 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rfx1P48377 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC8.98□□□□□ -0.97
Rfx1P48377 Ankrd55-203ENSMUST00000165593 2749 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Rfx1P48377 Arhgef3-202ENSMUST00000224981 3618 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Rfx1P48377 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC8.98□□□□□ -0.97
Rfx1P48377 Kcnj15-205ENSMUST00000113858 5309 ntTSL 5 BASIC8.98□□□□□ -0.97
Rfx1P48377 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms