Protein–RNA interactions for Protein: P41105

Rpl28, 60S ribosomal protein L28, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl28P41105 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Rpl28P41105 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Rpl28P41105 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC4.79□□□□□ -1.64
Rpl28P41105 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Rpl28P41105 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Rpl28P41105 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Rpl28P41105 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Rpl28P41105 Gm44228-201ENSMUST00000204888 2026 ntBASIC4.79□□□□□ -1.64
Rpl28P41105 Scd3-201ENSMUST00000026220 3470 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Rpl28P41105 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Rpl28P41105 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Rpl28P41105 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
Rpl28P41105 Gm37685-201ENSMUST00000193507 2177 ntBASIC4.78□□□□□ -1.64
Rpl28P41105 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Rpl28P41105 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Rpl28P41105 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Rpl28P41105 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Rpl28P41105 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Rpl28P41105 Trim40-203ENSMUST00000172711 1539 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Rpl28P41105 Gm21955-201ENSMUST00000194137 4968 ntBASIC4.78□□□□□ -1.64
Rpl28P41105 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Rpl28P41105 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Rpl28P41105 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Rpl28P41105 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Rpl28P41105 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Rpl28P41105 Nasp-203ENSMUST00000081182 1461 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Rpl28P41105 Gm22438-201ENSMUST00000104049 132 ntBASIC4.78□□□□□ -1.64
Rpl28P41105 Pilrb1-201ENSMUST00000110978 1020 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Rpl28P41105 Lipo4-201ENSMUST00000112511 1188 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Rpl28P41105 Gm13552-201ENSMUST00000118837 417 ntBASIC4.78□□□□□ -1.64
Rpl28P41105 Gm12710-201ENSMUST00000119011 216 ntBASIC4.78□□□□□ -1.64
Rpl28P41105 Gm14749-201ENSMUST00000121269 333 ntBASIC4.78□□□□□ -1.64
Rpl28P41105 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC4.78□□□□□ -1.64
Rpl28P41105 BC002163-201ENSMUST00000121906 319 ntBASIC4.78□□□□□ -1.64
Rpl28P41105 Gm11838-201ENSMUST00000121999 231 ntBASIC4.78□□□□□ -1.64
Rpl28P41105 Gm11739-201ENSMUST00000125269 723 ntTSL 3 BASIC4.78□□□□□ -1.64
Rpl28P41105 Trav8-2-201ENSMUST00000130122 337 ntBASIC4.78□□□□□ -1.64
Rpl28P41105 Gm14040-201ENSMUST00000139058 697 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Rpl28P41105 Gm11948-201ENSMUST00000142322 539 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Rpl28P41105 Mllt3-208ENSMUST00000149357 794 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Rpl28P41105 Gm26408-201ENSMUST00000157672 127 ntBASIC4.78□□□□□ -1.64
Rpl28P41105 Gm23276-201ENSMUST00000157913 138 ntBASIC4.78□□□□□ -1.64
Rpl28P41105 Ankrd55-204ENSMUST00000168684 1005 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Rpl28P41105 Gm20627-202ENSMUST00000176275 564 ntTSL 5 BASIC4.78□□□□□ -1.64
Rpl28P41105 BC065403-202ENSMUST00000184796 1043 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Rpl28P41105 Gm18033-201ENSMUST00000186678 550 ntBASIC4.78□□□□□ -1.64
Rpl28P41105 Gm29015-201ENSMUST00000187147 207 ntTSL 5 BASIC4.78□□□□□ -1.64
Rpl28P41105 Gm26672-203ENSMUST00000192501 756 ntTSL 3 BASIC4.78□□□□□ -1.64
Rpl28P41105 Gm42431-201ENSMUST00000196880 323 ntBASIC4.78□□□□□ -1.64
Rpl28P41105 Gm40319-201ENSMUST00000199785 481 ntBASIC4.78□□□□□ -1.64
Rpl28P41105 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Rpl28P41105 Gm29977-201ENSMUST00000206804 724 ntBASIC4.78□□□□□ -1.64
Rpl28P41105 Gm18060-201ENSMUST00000207407 564 ntBASIC4.78□□□□□ -1.64
Rpl28P41105 Gm30692-201ENSMUST00000208709 801 ntTSL 5 BASIC4.78□□□□□ -1.64
Rpl28P41105 Gm9354-201ENSMUST00000209075 468 ntBASIC4.78□□□□□ -1.64
Rpl28P41105 Gm34263-201ENSMUST00000214010 352 ntTSL 3 BASIC4.78□□□□□ -1.64
Rpl28P41105 Gm40853-201ENSMUST00000221342 582 ntBASIC4.78□□□□□ -1.64
Rpl28P41105 Gm9255-201ENSMUST00000223225 581 ntBASIC4.78□□□□□ -1.64
Rpl28P41105 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Rpl28P41105 Gm5564-201ENSMUST00000034916 967 ntBASIC4.78□□□□□ -1.64
Rpl28P41105 Tmem225-201ENSMUST00000046333 993 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Rpl28P41105 Olfr1449-201ENSMUST00000056005 948 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Rpl28P41105 Apoa2-201ENSMUST00000005824 492 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Rpl28P41105 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC4.78□□□□□ -1.64
Rpl28P41105 Arl9-201ENSMUST00000071199 402 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
Rpl28P41105 Gm15500-201ENSMUST00000071523 894 ntBASIC4.78□□□□□ -1.64
Rpl28P41105 Olfr890-201ENSMUST00000079804 945 ntBASIC4.78□□□□□ -1.64
Rpl28P41105 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Rpl28P41105 Mir135b-201ENSMUST00000083501 97 ntBASIC4.78□□□□□ -1.64
Rpl28P41105 Gm42969-201ENSMUST00000199858 3631 ntBASIC4.78□□□□□ -1.64
Rpl28P41105 Gm37183-201ENSMUST00000191712 3405 ntBASIC4.78□□□□□ -1.64
Rpl28P41105 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Rpl28P41105 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
Rpl28P41105 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Rpl28P41105 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Rpl28P41105 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Rpl28P41105 Gatad2b-203ENSMUST00000197988 1815 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Rpl28P41105 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Rpl28P41105 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Rpl28P41105 Gm35208-201ENSMUST00000221590 1411 ntTSL 5 BASIC4.78□□□□□ -1.64
Rpl28P41105 Gm44704-201ENSMUST00000208963 1990 ntBASIC4.78□□□□□ -1.64
Rpl28P41105 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Rpl28P41105 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Rpl28P41105 AC158605.3-201ENSMUST00000218999 2538 ntBASIC4.78□□□□□ -1.64
Rpl28P41105 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
Rpl28P41105 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Rpl28P41105 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Rpl28P41105 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Rpl28P41105 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Rpl28P41105 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Rpl28P41105 AC132384.7-201ENSMUST00000220198 1391 ntBASIC4.78□□□□□ -1.64
Rpl28P41105 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.65
Rpl28P41105 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Rpl28P41105 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Rpl28P41105 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Rpl28P41105 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Rpl28P41105 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Rpl28P41105 Gm37945-201ENSMUST00000192536 4367 ntBASIC4.77□□□□□ -1.65
Rpl28P41105 Gm37043-201ENSMUST00000194609 3105 ntBASIC4.77□□□□□ -1.65
Rpl28P41105 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms