Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm24422-201ENSMUST00000157800 119 ntBASIC7.09□□□□□ -1.27
Lire1P11260 Ankrd55-204ENSMUST00000168684 1005 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Lire1P11260 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Lire1P11260 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC7.09□□□□□ -1.27
Lire1P11260 Gm5350-201ENSMUST00000182057 1002 ntBASIC7.09□□□□□ -1.27
Lire1P11260 Gm5300-201ENSMUST00000182201 1003 ntBASIC7.09□□□□□ -1.27
Lire1P11260 Gm3121-201ENSMUST00000187086 406 ntBASIC7.09□□□□□ -1.27
Lire1P11260 Gm29517-201ENSMUST00000190744 351 ntBASIC7.09□□□□□ -1.27
Lire1P11260 Gm30275-201ENSMUST00000197620 498 ntTSL 2 BASIC7.09□□□□□ -1.27
Lire1P11260 Gm43743-201ENSMUST00000197898 697 ntBASIC7.09□□□□□ -1.27
Lire1P11260 Gm30771-201ENSMUST00000205683 737 ntTSL 3 BASIC7.09□□□□□ -1.27
Lire1P11260 A330076H08Rik-203ENSMUST00000208822 1164 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Lire1P11260 Gm45549-201ENSMUST00000210180 975 ntBASIC7.09□□□□□ -1.27
Lire1P11260 Gm35521-201ENSMUST00000211285 440 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Lire1P11260 Gm34418-201ENSMUST00000212879 309 ntTSL 5 BASIC7.09□□□□□ -1.27
Lire1P11260 Gpx4-ps2-202ENSMUST00000217344 782 ntBASIC7.09□□□□□ -1.27
Lire1P11260 AC132590.1-201ENSMUST00000224374 1164 ntBASIC7.09□□□□□ -1.27
Lire1P11260 Spcs1-206ENSMUST00000228736 702 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Lire1P11260 Mphosph6-201ENSMUST00000034303 1068 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Lire1P11260 Rps6-ps1-201ENSMUST00000074205 750 ntBASIC7.09□□□□□ -1.27
Lire1P11260 Gm10155-201ENSMUST00000084598 483 ntBASIC7.09□□□□□ -1.27
Lire1P11260 Gm6166-201ENSMUST00000098689 409 ntBASIC7.09□□□□□ -1.27
Lire1P11260 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Lire1P11260 Gm10693-201ENSMUST00000144146 2037 ntBASIC7.09□□□□□ -1.27
Lire1P11260 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Lire1P11260 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Lire1P11260 Mme-201ENSMUST00000029400 3782 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Lire1P11260 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Lire1P11260 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Lire1P11260 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Lire1P11260 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Lire1P11260 3830408C21Rik-202ENSMUST00000223895 1689 ntBASIC7.09□□□□□ -1.27
Lire1P11260 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
Lire1P11260 Zfp958-201ENSMUST00000073201 1401 ntTSL 5 BASIC7.09□□□□□ -1.28
Lire1P11260 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.28
Lire1P11260 Zfp939-201ENSMUST00000061201 2131 ntBASIC7.09□□□□□ -1.28
Lire1P11260 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.28
Lire1P11260 Gm38251-201ENSMUST00000192968 2575 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
Lire1P11260 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Lire1P11260 AC122769.3-201ENSMUST00000227739 3245 ntBASIC7.08□□□□□ -1.28
Lire1P11260 4930402H24Rik-201ENSMUST00000044766 6628 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
Lire1P11260 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Lire1P11260 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Lire1P11260 Nipsnap3a-202ENSMUST00000107666 1553 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Lire1P11260 Dram2-203ENSMUST00000121034 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Lire1P11260 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Lire1P11260 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Lire1P11260 Mir763-201ENSMUST00000103249 120 ntBASIC7.08□□□□□ -1.28
Lire1P11260 Gm23946-201ENSMUST00000104423 197 ntBASIC7.08□□□□□ -1.28
Lire1P11260 Gm23527-201ENSMUST00000104570 130 ntBASIC7.08□□□□□ -1.28
Lire1P11260 Gstm7-203ENSMUST00000106688 783 ntTSL 2 BASIC7.08□□□□□ -1.28
Lire1P11260 Lair1-204ENSMUST00000108600 742 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Lire1P11260 Gm14186-201ENSMUST00000120804 137 ntBASIC7.08□□□□□ -1.28
Lire1P11260 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Lire1P11260 H2-Ea-ps-201ENSMUST00000134042 686 ntBASIC7.08□□□□□ -1.28
Lire1P11260 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Lire1P11260 Gm11266-201ENSMUST00000139835 1271 ntTSL 2 BASIC7.08□□□□□ -1.28
Lire1P11260 1700123O12Rik-202ENSMUST00000141312 660 ntTSL 3 BASIC7.08□□□□□ -1.28
Lire1P11260 1700023C21Rik-201ENSMUST00000143247 389 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Lire1P11260 Gm14241-201ENSMUST00000151260 264 ntTSL 5 BASIC7.08□□□□□ -1.28
Lire1P11260 Gm25372-201ENSMUST00000158161 255 ntBASIC7.08□□□□□ -1.28
Lire1P11260 Gm22670-201ENSMUST00000158724 143 ntBASIC7.08□□□□□ -1.28
Lire1P11260 Gm20396-201ENSMUST00000173358 745 ntBASIC7.08□□□□□ -1.28
Lire1P11260 Gm4308-201ENSMUST00000179735 914 ntBASIC7.08□□□□□ -1.28
Lire1P11260 Gm4301-201ENSMUST00000186197 914 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Lire1P11260 9330159M07Rik-204ENSMUST00000188156 737 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Lire1P11260 Gm4312-201ENSMUST00000190264 914 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Lire1P11260 Gm8407-201ENSMUST00000192719 427 ntBASIC7.08□□□□□ -1.28
Lire1P11260 1700039M15Rik-201ENSMUST00000195377 1120 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Lire1P11260 Gm38170-201ENSMUST00000195404 816 ntBASIC7.08□□□□□ -1.28
Lire1P11260 C920008G01Rik-201ENSMUST00000196756 380 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Lire1P11260 Gm2287-201ENSMUST00000197417 1084 ntBASIC7.08□□□□□ -1.28
Lire1P11260 1700021F02Rik-201ENSMUST00000197576 350 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Lire1P11260 Hax1-204ENSMUST00000197725 648 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Lire1P11260 Speer9-ps1-201ENSMUST00000203447 775 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Lire1P11260 Gm17875-201ENSMUST00000216005 941 ntBASIC7.08□□□□□ -1.28
Lire1P11260 AC121788.2-201ENSMUST00000218284 1255 ntTSL 5 BASIC7.08□□□□□ -1.28
Lire1P11260 CT030170.6-202ENSMUST00000223186 544 ntBASIC7.08□□□□□ -1.28
Lire1P11260 9230104L09Rik-201ENSMUST00000028937 661 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Lire1P11260 Gkn2-201ENSMUST00000032128 788 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Lire1P11260 4930563M21Rik-201ENSMUST00000060468 792 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Lire1P11260 Snora9-201ENSMUST00000082579 133 ntBASIC7.08□□□□□ -1.28
Lire1P11260 B230118H07Rik-201ENSMUST00000090513 969 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Lire1P11260 Cmah-208ENSMUST00000224819 9482 ntBASIC7.08□□□□□ -1.28
Lire1P11260 2610020C07Rik-201ENSMUST00000181526 2925 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Lire1P11260 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Lire1P11260 Folh1-201ENSMUST00000001824 3125 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
Lire1P11260 Gm10619-201ENSMUST00000098372 2695 ntTSL 5 BASIC7.08□□□□□ -1.28
Lire1P11260 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
Lire1P11260 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Lire1P11260 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
Lire1P11260 Gm14546-201ENSMUST00000138275 1647 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Lire1P11260 Musk-203ENSMUST00000098057 3422 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Lire1P11260 Ldhc-201ENSMUST00000014545 1370 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Lire1P11260 Magea5-201ENSMUST00000069556 1360 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
Lire1P11260 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Lire1P11260 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Lire1P11260 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Lire1P11260 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Lire1P11260 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms