Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Trim66-203ENSMUST00000106741 4417 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
NpcdF8VQB8 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC9.12□□□□□ -0.95
NpcdF8VQB8 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC9.12□□□□□ -0.95
NpcdF8VQB8 Ipcef1-201ENSMUST00000078070 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
NpcdF8VQB8 Iqch-206ENSMUST00000171243 3099 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
NpcdF8VQB8 Gm5493-201ENSMUST00000182063 1952 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
NpcdF8VQB8 Gm15421-202ENSMUST00000118224 399 ntBASIC9.12□□□□□ -0.95
NpcdF8VQB8 Gm11370-201ENSMUST00000120583 260 ntBASIC9.12□□□□□ -0.95
NpcdF8VQB8 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
NpcdF8VQB8 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
NpcdF8VQB8 Cd180-202ENSMUST00000167144 430 ntTSL 2 BASIC9.12□□□□□ -0.95
NpcdF8VQB8 Gm20452-201ENSMUST00000174686 513 ntBASIC9.12□□□□□ -0.95
NpcdF8VQB8 Gm25574-201ENSMUST00000175245 249 ntBASIC9.12□□□□□ -0.95
NpcdF8VQB8 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
NpcdF8VQB8 Gm5445-201ENSMUST00000180224 480 ntBASIC9.12□□□□□ -0.95
NpcdF8VQB8 Gm29640-201ENSMUST00000187972 278 ntBASIC9.12□□□□□ -0.95
NpcdF8VQB8 Gm36966-201ENSMUST00000192217 413 ntBASIC9.12□□□□□ -0.95
NpcdF8VQB8 Gm44356-201ENSMUST00000196731 111 ntBASIC9.12□□□□□ -0.95
NpcdF8VQB8 Selenok-ps7-201ENSMUST00000197069 283 ntBASIC9.12□□□□□ -0.95
NpcdF8VQB8 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
NpcdF8VQB8 Gm20670-201ENSMUST00000206468 338 ntTSL 3 BASIC9.12□□□□□ -0.95
NpcdF8VQB8 Gm10688-201ENSMUST00000214985 520 ntBASIC9.12□□□□□ -0.95
NpcdF8VQB8 AC153932.1-201ENSMUST00000218558 787 ntBASIC9.12□□□□□ -0.95
NpcdF8VQB8 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC9.12□□□□□ -0.95
NpcdF8VQB8 AC174082.2-201ENSMUST00000222094 543 ntBASIC9.12□□□□□ -0.95
NpcdF8VQB8 CT025639.2-201ENSMUST00000224440 1220 ntBASIC9.12□□□□□ -0.95
NpcdF8VQB8 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
NpcdF8VQB8 Gm22684-201ENSMUST00000082849 132 ntBASIC9.12□□□□□ -0.95
NpcdF8VQB8 Rhoh-201ENSMUST00000031106 5093 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
NpcdF8VQB8 Gm28670-201ENSMUST00000185365 1498 ntTSL 5 BASIC9.12□□□□□ -0.95
NpcdF8VQB8 Gm29537-202ENSMUST00000186153 1498 ntTSL 5 BASIC9.12□□□□□ -0.95
NpcdF8VQB8 Gm29497-201ENSMUST00000186801 1498 ntTSL 5 BASIC9.12□□□□□ -0.95
NpcdF8VQB8 Gm28568-201ENSMUST00000187762 1498 ntTSL 5 BASIC9.12□□□□□ -0.95
NpcdF8VQB8 Gm29445-202ENSMUST00000189947 1497 ntTSL 5 BASIC9.12□□□□□ -0.95
NpcdF8VQB8 Gm28458-202ENSMUST00000190542 1497 ntTSL 5 BASIC9.12□□□□□ -0.95
NpcdF8VQB8 Gm28457-202ENSMUST00000191277 1498 ntTSL 5 BASIC9.12□□□□□ -0.95
NpcdF8VQB8 Gm37654-201ENSMUST00000193019 1498 ntTSL 5 BASIC9.12□□□□□ -0.95
NpcdF8VQB8 Svil-210ENSMUST00000140448 7423 ntAPPRIS P3 TSL 5 BASIC9.12□□□□□ -0.95
NpcdF8VQB8 Epg5-201ENSMUST00000044622 9672 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
NpcdF8VQB8 Olfr654-203ENSMUST00000213984 3063 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
NpcdF8VQB8 Umps-201ENSMUST00000023510 3484 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
NpcdF8VQB8 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
NpcdF8VQB8 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
NpcdF8VQB8 Ctps2-201ENSMUST00000033727 3353 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
NpcdF8VQB8 Cdh8-207ENSMUST00000155527 3159 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
NpcdF8VQB8 Mycbpap-202ENSMUST00000093945 3168 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
NpcdF8VQB8 Zhx3-202ENSMUST00000103112 9109 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
NpcdF8VQB8 Gm43917-201ENSMUST00000191984 2360 ntBASIC9.12□□□□□ -0.95
NpcdF8VQB8 Gm28157-201ENSMUST00000187675 2165 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
NpcdF8VQB8 Gm29146-201ENSMUST00000188904 2165 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
NpcdF8VQB8 Gm28772-201ENSMUST00000189554 2165 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
NpcdF8VQB8 Gm37547-201ENSMUST00000193277 2165 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
NpcdF8VQB8 Serping1-201ENSMUST00000023994 1768 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
NpcdF8VQB8 Pan2-206ENSMUST00000219721 4316 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
NpcdF8VQB8 Adgrd1-203ENSMUST00000156437 4141 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
NpcdF8VQB8 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC9.12□□□□□ -0.95
NpcdF8VQB8 Gprasp2-201ENSMUST00000113136 3736 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
NpcdF8VQB8 Csnk1d-202ENSMUST00000070575 3500 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
NpcdF8VQB8 Vmn2r-ps96-201ENSMUST00000221218 2545 ntBASIC9.11□□□□□ -0.95
NpcdF8VQB8 Synj2-201ENSMUST00000061091 4072 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
NpcdF8VQB8 Ttc41-203ENSMUST00000217747 1949 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
NpcdF8VQB8 Ms4a6b-205ENSMUST00000163078 2680 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
NpcdF8VQB8 Pgbd1-205ENSMUST00000151743 2642 ntAPPRIS P4 TSL 1 (best) BASIC9.11□□□□□ -0.95
NpcdF8VQB8 Grik2-201ENSMUST00000079751 2610 ntTSL 2 BASIC9.11□□□□□ -0.95
NpcdF8VQB8 Gm37274-201ENSMUST00000192167 1682 ntBASIC9.11□□□□□ -0.95
NpcdF8VQB8 Adam5-202ENSMUST00000118419 2791 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
NpcdF8VQB8 Afm-201ENSMUST00000113179 2038 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
NpcdF8VQB8 Gm10600-201ENSMUST00000117202 2047 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
NpcdF8VQB8 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
NpcdF8VQB8 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC9.11□□□□□ -0.95
NpcdF8VQB8 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC9.11□□□□□ -0.95
NpcdF8VQB8 Gm11649-201ENSMUST00000118214 375 ntBASIC9.11□□□□□ -0.95
NpcdF8VQB8 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC9.11□□□□□ -0.95
NpcdF8VQB8 Gm16523-201ENSMUST00000121253 592 ntBASIC9.11□□□□□ -0.95
NpcdF8VQB8 Gm12369-201ENSMUST00000121343 942 ntBASIC9.11□□□□□ -0.95
NpcdF8VQB8 Gm6451-201ENSMUST00000121488 717 ntBASIC9.11□□□□□ -0.95
NpcdF8VQB8 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
NpcdF8VQB8 Gm14353-201ENSMUST00000122200 869 ntBASIC9.11□□□□□ -0.95
NpcdF8VQB8 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC9.11□□□□□ -0.95
NpcdF8VQB8 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC9.11□□□□□ -0.95
NpcdF8VQB8 9530046B11Rik-201ENSMUST00000149413 1157 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
NpcdF8VQB8 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
NpcdF8VQB8 Gm16138-201ENSMUST00000159341 821 ntBASIC9.11□□□□□ -0.95
NpcdF8VQB8 Gm4907-202ENSMUST00000163718 1236 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
NpcdF8VQB8 Gm3715-201ENSMUST00000172308 617 ntBASIC9.11□□□□□ -0.95
NpcdF8VQB8 Gm4831-201ENSMUST00000174626 594 ntBASIC9.11□□□□□ -0.95
NpcdF8VQB8 Mir3085-201ENSMUST00000175493 89 ntBASIC9.11□□□□□ -0.95
NpcdF8VQB8 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC9.11□□□□□ -0.95
NpcdF8VQB8 Gm29066-201ENSMUST00000188502 452 ntTSL 3 BASIC9.11□□□□□ -0.95
NpcdF8VQB8 Gm29008-201ENSMUST00000189387 298 ntBASIC9.11□□□□□ -0.95
NpcdF8VQB8 Gm20776-201ENSMUST00000189940 700 ntBASIC9.11□□□□□ -0.95
NpcdF8VQB8 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
NpcdF8VQB8 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
NpcdF8VQB8 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
NpcdF8VQB8 Gm44392-201ENSMUST00000196758 115 ntBASIC9.11□□□□□ -0.95
NpcdF8VQB8 Gm43063-201ENSMUST00000198198 1081 ntBASIC9.11□□□□□ -0.95
NpcdF8VQB8 Gm8703-201ENSMUST00000203793 730 ntBASIC9.11□□□□□ -0.95
NpcdF8VQB8 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
NpcdF8VQB8 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
NpcdF8VQB8 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC9.11□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms