Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
H2afb3S4R1G7 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H2afb3S4R1G7 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H2afb3S4R1G7 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
H2afb3S4R1G7 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H2afb3S4R1G7 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
H2afb3S4R1G7 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
H2afb3S4R1G7 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H2afb3S4R1G7 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
H2afb3S4R1G7 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
H2afb3S4R1G7 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
H2afb3S4R1G7 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
H2afb3S4R1G7 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
H2afb3S4R1G7 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
H2afb3S4R1G7 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
H2afb3S4R1G7 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
H2afb3S4R1G7 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
H2afb3S4R1G7 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
H2afb3S4R1G7 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
H2afb3S4R1G7 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
H2afb3S4R1G7 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.52■□□□□ 0.23
H2afb3S4R1G7 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
H2afb3S4R1G7 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.52■□□□□ 0.23
H2afb3S4R1G7 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
H2afb3S4R1G7 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
H2afb3S4R1G7 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
H2afb3S4R1G7 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
H2afb3S4R1G7 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
H2afb3S4R1G7 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
H2afb3S4R1G7 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
H2afb3S4R1G7 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.52■□□□□ 0.23
H2afb3S4R1G7 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
H2afb3S4R1G7 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
H2afb3S4R1G7 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.51■□□□□ 0.23
H2afb3S4R1G7 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.51■□□□□ 0.23
H2afb3S4R1G7 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
H2afb3S4R1G7 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
H2afb3S4R1G7 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
H2afb3S4R1G7 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
H2afb3S4R1G7 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
H2afb3S4R1G7 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
H2afb3S4R1G7 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.51■□□□□ 0.23
H2afb3S4R1G7 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.51■□□□□ 0.23
H2afb3S4R1G7 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
H2afb3S4R1G7 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
H2afb3S4R1G7 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
H2afb3S4R1G7 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
H2afb3S4R1G7 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
H2afb3S4R1G7 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
H2afb3S4R1G7 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
H2afb3S4R1G7 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
H2afb3S4R1G7 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
H2afb3S4R1G7 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
H2afb3S4R1G7 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
H2afb3S4R1G7 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
H2afb3S4R1G7 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
H2afb3S4R1G7 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.5■□□□□ 0.23
H2afb3S4R1G7 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
H2afb3S4R1G7 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.5■□□□□ 0.23
H2afb3S4R1G7 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
H2afb3S4R1G7 Gm38205-201ENSMUST00000192243 258 ntBASIC16.5■□□□□ 0.23
H2afb3S4R1G7 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.5■□□□□ 0.23
H2afb3S4R1G7 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
H2afb3S4R1G7 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
H2afb3S4R1G7 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
H2afb3S4R1G7 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
H2afb3S4R1G7 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.5■□□□□ 0.23
H2afb3S4R1G7 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
H2afb3S4R1G7 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
H2afb3S4R1G7 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
H2afb3S4R1G7 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
H2afb3S4R1G7 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
H2afb3S4R1G7 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.49■□□□□ 0.23
H2afb3S4R1G7 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.49■□□□□ 0.23
H2afb3S4R1G7 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
H2afb3S4R1G7 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
H2afb3S4R1G7 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
H2afb3S4R1G7 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
H2afb3S4R1G7 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
H2afb3S4R1G7 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
H2afb3S4R1G7 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2afb3S4R1G7 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2afb3S4R1G7 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.48■□□□□ 0.23
H2afb3S4R1G7 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2afb3S4R1G7 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2afb3S4R1G7 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
H2afb3S4R1G7 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2afb3S4R1G7 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
H2afb3S4R1G7 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2afb3S4R1G7 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2afb3S4R1G7 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2afb3S4R1G7 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2afb3S4R1G7 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2afb3S4R1G7 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2afb3S4R1G7 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2afb3S4R1G7 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2afb3S4R1G7 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2afb3S4R1G7 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.47■□□□□ 0.23
H2afb3S4R1G7 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
H2afb3S4R1G7 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms