Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Msh5Q9QUM7 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Msh5Q9QUM7 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.7■□□□□ 0.58
Msh5Q9QUM7 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Msh5Q9QUM7 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Msh5Q9QUM7 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Msh5Q9QUM7 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Msh5Q9QUM7 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Msh5Q9QUM7 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Msh5Q9QUM7 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Msh5Q9QUM7 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Msh5Q9QUM7 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Msh5Q9QUM7 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Msh5Q9QUM7 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Msh5Q9QUM7 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Msh5Q9QUM7 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Msh5Q9QUM7 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Msh5Q9QUM7 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh5Q9QUM7 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh5Q9QUM7 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh5Q9QUM7 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh5Q9QUM7 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Msh5Q9QUM7 Reep4-203ENSMUST00000226563 1444 ntBASIC18.68■□□□□ 0.58
Msh5Q9QUM7 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Msh5Q9QUM7 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh5Q9QUM7 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Msh5Q9QUM7 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.68■□□□□ 0.58
Msh5Q9QUM7 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
Msh5Q9QUM7 Gm38205-201ENSMUST00000192243 258 ntBASIC18.68■□□□□ 0.58
Msh5Q9QUM7 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Msh5Q9QUM7 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.68■□□□□ 0.58
Msh5Q9QUM7 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Msh5Q9QUM7 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh5Q9QUM7 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Msh5Q9QUM7 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Msh5Q9QUM7 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Msh5Q9QUM7 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Msh5Q9QUM7 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.67■□□□□ 0.58
Msh5Q9QUM7 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Msh5Q9QUM7 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Msh5Q9QUM7 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Msh5Q9QUM7 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Msh5Q9QUM7 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.67■□□□□ 0.58
Msh5Q9QUM7 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.67■□□□□ 0.58
Msh5Q9QUM7 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.67■□□□□ 0.58
Msh5Q9QUM7 Gm44136-201ENSMUST00000203819 1106 ntBASIC18.67■□□□□ 0.58
Msh5Q9QUM7 Gm5874-201ENSMUST00000096101 508 ntBASIC18.67■□□□□ 0.58
Msh5Q9QUM7 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.67■□□□□ 0.58
Msh5Q9QUM7 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Msh5Q9QUM7 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Msh5Q9QUM7 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Msh5Q9QUM7 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Msh5Q9QUM7 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Msh5Q9QUM7 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Msh5Q9QUM7 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Msh5Q9QUM7 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Msh5Q9QUM7 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Msh5Q9QUM7 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.66■□□□□ 0.58
Msh5Q9QUM7 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Msh5Q9QUM7 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Msh5Q9QUM7 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Msh5Q9QUM7 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Msh5Q9QUM7 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
Msh5Q9QUM7 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Msh5Q9QUM7 Gm11434-201ENSMUST00000122379 629 ntBASIC18.66■□□□□ 0.58
Msh5Q9QUM7 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.66■□□□□ 0.58
Msh5Q9QUM7 Gm42778-201ENSMUST00000199644 553 ntBASIC18.66■□□□□ 0.58
Msh5Q9QUM7 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Msh5Q9QUM7 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Msh5Q9QUM7 Gm5049-201ENSMUST00000195878 1590 ntBASIC18.66■□□□□ 0.58
Msh5Q9QUM7 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Msh5Q9QUM7 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Msh5Q9QUM7 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.66■□□□□ 0.58
Msh5Q9QUM7 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Msh5Q9QUM7 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Msh5Q9QUM7 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.66■□□□□ 0.58
Msh5Q9QUM7 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Msh5Q9QUM7 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Msh5Q9QUM7 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Msh5Q9QUM7 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Msh5Q9QUM7 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.66■□□□□ 0.58
Msh5Q9QUM7 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Msh5Q9QUM7 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.66■□□□□ 0.58
Msh5Q9QUM7 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Msh5Q9QUM7 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Msh5Q9QUM7 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Msh5Q9QUM7 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Msh5Q9QUM7 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.65■□□□□ 0.58
Msh5Q9QUM7 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Msh5Q9QUM7 Gm43930-201ENSMUST00000203868 845 ntBASIC18.65■□□□□ 0.58
Msh5Q9QUM7 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Msh5Q9QUM7 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Msh5Q9QUM7 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.65■□□□□ 0.58
Msh5Q9QUM7 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Msh5Q9QUM7 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.65■□□□□ 0.58
Msh5Q9QUM7 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Msh5Q9QUM7 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Msh5Q9QUM7 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Msh5Q9QUM7 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Msh5Q9QUM7 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms