Protein–RNA interactions for Protein: Q9ES97

Rtn3, Reticulon-3, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3Q9ES97 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtn3Q9ES97 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtn3Q9ES97 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rtn3Q9ES97 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtn3Q9ES97 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.56■□□□□ 0.72
Rtn3Q9ES97 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtn3Q9ES97 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtn3Q9ES97 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtn3Q9ES97 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtn3Q9ES97 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtn3Q9ES97 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rtn3Q9ES97 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Rtn3Q9ES97 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rtn3Q9ES97 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rtn3Q9ES97 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Rtn3Q9ES97 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.55■□□□□ 0.72
Rtn3Q9ES97 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rtn3Q9ES97 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rtn3Q9ES97 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Rtn3Q9ES97 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rtn3Q9ES97 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rtn3Q9ES97 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rtn3Q9ES97 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rtn3Q9ES97 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
Rtn3Q9ES97 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rtn3Q9ES97 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rtn3Q9ES97 Gm13146-201ENSMUST00000118508 780 ntBASIC19.54■□□□□ 0.72
Rtn3Q9ES97 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.54■□□□□ 0.72
Rtn3Q9ES97 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.54■□□□□ 0.72
Rtn3Q9ES97 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rtn3Q9ES97 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.54■□□□□ 0.72
Rtn3Q9ES97 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rtn3Q9ES97 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rtn3Q9ES97 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Rtn3Q9ES97 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.54■□□□□ 0.72
Rtn3Q9ES97 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rtn3Q9ES97 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rtn3Q9ES97 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rtn3Q9ES97 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rtn3Q9ES97 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rtn3Q9ES97 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rtn3Q9ES97 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rtn3Q9ES97 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.53■□□□□ 0.72
Rtn3Q9ES97 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.53■□□□□ 0.72
Rtn3Q9ES97 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rtn3Q9ES97 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rtn3Q9ES97 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.53■□□□□ 0.72
Rtn3Q9ES97 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rtn3Q9ES97 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rtn3Q9ES97 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rtn3Q9ES97 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Rtn3Q9ES97 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Rtn3Q9ES97 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rtn3Q9ES97 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.52■□□□□ 0.72
Rtn3Q9ES97 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rtn3Q9ES97 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rtn3Q9ES97 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rtn3Q9ES97 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.52■□□□□ 0.71
Rtn3Q9ES97 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rtn3Q9ES97 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rtn3Q9ES97 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rtn3Q9ES97 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rtn3Q9ES97 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.51■□□□□ 0.71
Rtn3Q9ES97 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Rtn3Q9ES97 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rtn3Q9ES97 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rtn3Q9ES97 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rtn3Q9ES97 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rtn3Q9ES97 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rtn3Q9ES97 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rtn3Q9ES97 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rtn3Q9ES97 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rtn3Q9ES97 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rtn3Q9ES97 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rtn3Q9ES97 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
Rtn3Q9ES97 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rtn3Q9ES97 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Rtn3Q9ES97 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rtn3Q9ES97 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Rtn3Q9ES97 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rtn3Q9ES97 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Rtn3Q9ES97 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
Rtn3Q9ES97 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rtn3Q9ES97 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rtn3Q9ES97 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rtn3Q9ES97 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rtn3Q9ES97 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rtn3Q9ES97 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Rtn3Q9ES97 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Rtn3Q9ES97 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rtn3Q9ES97 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.49■□□□□ 0.71
Rtn3Q9ES97 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rtn3Q9ES97 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rtn3Q9ES97 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rtn3Q9ES97 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rtn3Q9ES97 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rtn3Q9ES97 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Rtn3Q9ES97 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rtn3Q9ES97 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rtn3Q9ES97 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms