Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ube4bQ9ES00 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ube4bQ9ES00 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ube4bQ9ES00 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ube4bQ9ES00 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ube4bQ9ES00 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.66■□□□□ 0.42
Ube4bQ9ES00 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.66■□□□□ 0.42
Ube4bQ9ES00 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ube4bQ9ES00 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ube4bQ9ES00 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ube4bQ9ES00 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ube4bQ9ES00 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ube4bQ9ES00 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ube4bQ9ES00 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ube4bQ9ES00 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ube4bQ9ES00 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ube4bQ9ES00 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ube4bQ9ES00 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ube4bQ9ES00 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ube4bQ9ES00 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ube4bQ9ES00 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ube4bQ9ES00 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ube4bQ9ES00 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ube4bQ9ES00 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Ube4bQ9ES00 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ube4bQ9ES00 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.65■□□□□ 0.42
Ube4bQ9ES00 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Ube4bQ9ES00 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ube4bQ9ES00 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ube4bQ9ES00 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ube4bQ9ES00 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ube4bQ9ES00 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ube4bQ9ES00 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ube4bQ9ES00 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ube4bQ9ES00 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.64■□□□□ 0.42
Ube4bQ9ES00 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ube4bQ9ES00 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ube4bQ9ES00 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Ube4bQ9ES00 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ube4bQ9ES00 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ube4bQ9ES00 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ube4bQ9ES00 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ube4bQ9ES00 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ube4bQ9ES00 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ube4bQ9ES00 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ube4bQ9ES00 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ube4bQ9ES00 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Ube4bQ9ES00 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Ube4bQ9ES00 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ube4bQ9ES00 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Ube4bQ9ES00 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
Ube4bQ9ES00 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ube4bQ9ES00 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Ube4bQ9ES00 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Ube4bQ9ES00 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ube4bQ9ES00 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.63■□□□□ 0.41
Ube4bQ9ES00 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ube4bQ9ES00 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ube4bQ9ES00 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ube4bQ9ES00 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.63■□□□□ 0.41
Ube4bQ9ES00 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ube4bQ9ES00 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ube4bQ9ES00 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ube4bQ9ES00 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ube4bQ9ES00 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ube4bQ9ES00 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
Ube4bQ9ES00 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ube4bQ9ES00 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ube4bQ9ES00 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ube4bQ9ES00 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ube4bQ9ES00 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ube4bQ9ES00 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.63■□□□□ 0.41
Ube4bQ9ES00 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ube4bQ9ES00 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.62■□□□□ 0.41
Ube4bQ9ES00 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ube4bQ9ES00 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ube4bQ9ES00 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ube4bQ9ES00 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ube4bQ9ES00 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ube4bQ9ES00 AA386476-201ENSMUST00000098781 1665 ntBASIC17.62■□□□□ 0.41
Ube4bQ9ES00 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ube4bQ9ES00 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ube4bQ9ES00 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ube4bQ9ES00 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ube4bQ9ES00 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.62■□□□□ 0.41
Ube4bQ9ES00 Gm45102-201ENSMUST00000207427 857 ntBASIC17.62■□□□□ 0.41
Ube4bQ9ES00 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
Ube4bQ9ES00 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.62■□□□□ 0.41
Ube4bQ9ES00 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ube4bQ9ES00 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ube4bQ9ES00 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ube4bQ9ES00 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ube4bQ9ES00 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ube4bQ9ES00 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ube4bQ9ES00 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Ube4bQ9ES00 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ube4bQ9ES00 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ube4bQ9ES00 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ube4bQ9ES00 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ube4bQ9ES00 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms