Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rtp4Q9ER80 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Rtp4Q9ER80 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Rtp4Q9ER80 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtp4Q9ER80 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtp4Q9ER80 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Rtp4Q9ER80 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtp4Q9ER80 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtp4Q9ER80 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtp4Q9ER80 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.2■□□□□ 0.34
Rtp4Q9ER80 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtp4Q9ER80 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtp4Q9ER80 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtp4Q9ER80 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtp4Q9ER80 Gm12527-201ENSMUST00000117967 564 ntBASIC17.2■□□□□ 0.34
Rtp4Q9ER80 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.2■□□□□ 0.34
Rtp4Q9ER80 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.2■□□□□ 0.34
Rtp4Q9ER80 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Rtp4Q9ER80 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.2■□□□□ 0.34
Rtp4Q9ER80 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtp4Q9ER80 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
Rtp4Q9ER80 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtp4Q9ER80 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtp4Q9ER80 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rtp4Q9ER80 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtp4Q9ER80 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rtp4Q9ER80 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtp4Q9ER80 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rtp4Q9ER80 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Rtp4Q9ER80 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Rtp4Q9ER80 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.19■□□□□ 0.34
Rtp4Q9ER80 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rtp4Q9ER80 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rtp4Q9ER80 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rtp4Q9ER80 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rtp4Q9ER80 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rtp4Q9ER80 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rtp4Q9ER80 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rtp4Q9ER80 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rtp4Q9ER80 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rtp4Q9ER80 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rtp4Q9ER80 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Rtp4Q9ER80 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.18■□□□□ 0.34
Rtp4Q9ER80 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rtp4Q9ER80 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rtp4Q9ER80 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Rtp4Q9ER80 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rtp4Q9ER80 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rtp4Q9ER80 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.18■□□□□ 0.34
Rtp4Q9ER80 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rtp4Q9ER80 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Rtp4Q9ER80 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rtp4Q9ER80 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rtp4Q9ER80 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rtp4Q9ER80 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Rtp4Q9ER80 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rtp4Q9ER80 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rtp4Q9ER80 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Rtp4Q9ER80 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rtp4Q9ER80 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rtp4Q9ER80 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rtp4Q9ER80 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Rtp4Q9ER80 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.17■□□□□ 0.34
Rtp4Q9ER80 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.17■□□□□ 0.34
Rtp4Q9ER80 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rtp4Q9ER80 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.17■□□□□ 0.34
Rtp4Q9ER80 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rtp4Q9ER80 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rtp4Q9ER80 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Rtp4Q9ER80 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rtp4Q9ER80 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rtp4Q9ER80 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.16■□□□□ 0.34
Rtp4Q9ER80 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.16■□□□□ 0.34
Rtp4Q9ER80 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rtp4Q9ER80 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtp4Q9ER80 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.16■□□□□ 0.34
Rtp4Q9ER80 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtp4Q9ER80 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtp4Q9ER80 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtp4Q9ER80 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rtp4Q9ER80 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Rtp4Q9ER80 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtp4Q9ER80 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtp4Q9ER80 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Rtp4Q9ER80 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Rtp4Q9ER80 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rtp4Q9ER80 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtp4Q9ER80 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Rtp4Q9ER80 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtp4Q9ER80 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rtp4Q9ER80 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtp4Q9ER80 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtp4Q9ER80 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rtp4Q9ER80 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtp4Q9ER80 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.15■□□□□ 0.34
Rtp4Q9ER80 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.15■□□□□ 0.34
Rtp4Q9ER80 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.15■□□□□ 0.34
Rtp4Q9ER80 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtp4Q9ER80 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Rtp4Q9ER80 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms