Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.84■□□□□ 0.29
Hmg20aQ9DC33 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Hmg20aQ9DC33 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC16.83■□□□□ 0.28
Hmg20aQ9DC33 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmg20aQ9DC33 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Hmg20aQ9DC33 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Hmg20aQ9DC33 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Hmg20aQ9DC33 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmg20aQ9DC33 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmg20aQ9DC33 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmg20aQ9DC33 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmg20aQ9DC33 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmg20aQ9DC33 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmg20aQ9DC33 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hmg20aQ9DC33 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmg20aQ9DC33 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmg20aQ9DC33 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmg20aQ9DC33 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.82■□□□□ 0.28
Hmg20aQ9DC33 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmg20aQ9DC33 AA386476-201ENSMUST00000098781 1665 ntBASIC16.82■□□□□ 0.28
Hmg20aQ9DC33 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmg20aQ9DC33 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Hmg20aQ9DC33 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hmg20aQ9DC33 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmg20aQ9DC33 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmg20aQ9DC33 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC16.82■□□□□ 0.28
Hmg20aQ9DC33 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.82■□□□□ 0.28
Hmg20aQ9DC33 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hmg20aQ9DC33 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.82■□□□□ 0.28
Hmg20aQ9DC33 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmg20aQ9DC33 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.82■□□□□ 0.28
Hmg20aQ9DC33 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmg20aQ9DC33 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmg20aQ9DC33 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmg20aQ9DC33 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmg20aQ9DC33 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Hmg20aQ9DC33 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmg20aQ9DC33 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmg20aQ9DC33 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmg20aQ9DC33 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmg20aQ9DC33 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmg20aQ9DC33 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Hmg20aQ9DC33 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.28
Hmg20aQ9DC33 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmg20aQ9DC33 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.81■□□□□ 0.28
Hmg20aQ9DC33 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmg20aQ9DC33 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmg20aQ9DC33 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hmg20aQ9DC33 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmg20aQ9DC33 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.81■□□□□ 0.28
Hmg20aQ9DC33 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmg20aQ9DC33 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmg20aQ9DC33 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmg20aQ9DC33 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmg20aQ9DC33 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmg20aQ9DC33 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmg20aQ9DC33 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmg20aQ9DC33 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmg20aQ9DC33 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmg20aQ9DC33 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Hmg20aQ9DC33 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmg20aQ9DC33 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmg20aQ9DC33 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmg20aQ9DC33 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmg20aQ9DC33 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Hmg20aQ9DC33 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmg20aQ9DC33 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmg20aQ9DC33 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.8■□□□□ 0.28
Hmg20aQ9DC33 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmg20aQ9DC33 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmg20aQ9DC33 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hmg20aQ9DC33 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hmg20aQ9DC33 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hmg20aQ9DC33 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hmg20aQ9DC33 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hmg20aQ9DC33 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hmg20aQ9DC33 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hmg20aQ9DC33 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.79■□□□□ 0.28
Hmg20aQ9DC33 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Hmg20aQ9DC33 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmg20aQ9DC33 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmg20aQ9DC33 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmg20aQ9DC33 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Hmg20aQ9DC33 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Hmg20aQ9DC33 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Hmg20aQ9DC33 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.78■□□□□ 0.28
Hmg20aQ9DC33 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.78■□□□□ 0.28
Hmg20aQ9DC33 Gm40881-201ENSMUST00000223397 166 ntBASIC16.78■□□□□ 0.28
Hmg20aQ9DC33 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmg20aQ9DC33 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmg20aQ9DC33 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmg20aQ9DC33 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmg20aQ9DC33 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.78■□□□□ 0.28
Hmg20aQ9DC33 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmg20aQ9DC33 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmg20aQ9DC33 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmg20aQ9DC33 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmg20aQ9DC33 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmg20aQ9DC33 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hmg20aQ9DC33 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms