Protein–RNA interactions for Protein: Q9D287

Bcas2, Pre-mRNA-splicing factor SPF27, mousemouse

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bcas2Q9D287 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Bcas2Q9D287 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Bcas2Q9D287 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Bcas2Q9D287 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Bcas2Q9D287 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Bcas2Q9D287 Fst-202ENSMUST00000223640 2612 ntBASIC17.79■□□□□ 0.44
Bcas2Q9D287 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Bcas2Q9D287 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.79■□□□□ 0.44
Bcas2Q9D287 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Bcas2Q9D287 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Bcas2Q9D287 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Bcas2Q9D287 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.78■□□□□ 0.44
Bcas2Q9D287 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Bcas2Q9D287 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Bcas2Q9D287 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Bcas2Q9D287 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.78■□□□□ 0.44
Bcas2Q9D287 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Bcas2Q9D287 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.78■□□□□ 0.44
Bcas2Q9D287 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.78■□□□□ 0.44
Bcas2Q9D287 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Bcas2Q9D287 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Bcas2Q9D287 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Bcas2Q9D287 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Bcas2Q9D287 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Bcas2Q9D287 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Bcas2Q9D287 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Bcas2Q9D287 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.77■□□□□ 0.44
Bcas2Q9D287 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.77■□□□□ 0.44
Bcas2Q9D287 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Bcas2Q9D287 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Bcas2Q9D287 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Bcas2Q9D287 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
Bcas2Q9D287 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.77■□□□□ 0.44
Bcas2Q9D287 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Bcas2Q9D287 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Bcas2Q9D287 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Bcas2Q9D287 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Bcas2Q9D287 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.77■□□□□ 0.44
Bcas2Q9D287 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Bcas2Q9D287 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Bcas2Q9D287 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Bcas2Q9D287 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Bcas2Q9D287 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.76■□□□□ 0.43
Bcas2Q9D287 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Bcas2Q9D287 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
Bcas2Q9D287 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Bcas2Q9D287 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Bcas2Q9D287 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Bcas2Q9D287 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Bcas2Q9D287 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Bcas2Q9D287 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Bcas2Q9D287 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Bcas2Q9D287 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Bcas2Q9D287 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Bcas2Q9D287 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Bcas2Q9D287 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.75■□□□□ 0.43
Bcas2Q9D287 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Bcas2Q9D287 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Bcas2Q9D287 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Bcas2Q9D287 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.75■□□□□ 0.43
Bcas2Q9D287 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Bcas2Q9D287 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Bcas2Q9D287 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.75■□□□□ 0.43
Bcas2Q9D287 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Bcas2Q9D287 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Bcas2Q9D287 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Bcas2Q9D287 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Bcas2Q9D287 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Bcas2Q9D287 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.74■□□□□ 0.43
Bcas2Q9D287 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Bcas2Q9D287 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Bcas2Q9D287 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.74■□□□□ 0.43
Bcas2Q9D287 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Bcas2Q9D287 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Bcas2Q9D287 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Bcas2Q9D287 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Bcas2Q9D287 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Bcas2Q9D287 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Bcas2Q9D287 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Bcas2Q9D287 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Bcas2Q9D287 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Bcas2Q9D287 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Bcas2Q9D287 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Bcas2Q9D287 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.73■□□□□ 0.43
Bcas2Q9D287 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Bcas2Q9D287 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Bcas2Q9D287 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Bcas2Q9D287 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
Bcas2Q9D287 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Bcas2Q9D287 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Bcas2Q9D287 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.73■□□□□ 0.43
Bcas2Q9D287 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Bcas2Q9D287 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Bcas2Q9D287 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Bcas2Q9D287 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Bcas2Q9D287 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Bcas2Q9D287 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Bcas2Q9D287 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Bcas2Q9D287 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Bcas2Q9D287 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms