Protein–RNA interactions for Protein: Q9CXH3

3300002I08Rik, RIKEN cDNA 3300002I08, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
3300002I08RikQ9CXH3 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.96■□□□□ 0.47
3300002I08RikQ9CXH3 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
3300002I08RikQ9CXH3 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
3300002I08RikQ9CXH3 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.96■□□□□ 0.47
3300002I08RikQ9CXH3 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
3300002I08RikQ9CXH3 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
3300002I08RikQ9CXH3 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
3300002I08RikQ9CXH3 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
3300002I08RikQ9CXH3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
3300002I08RikQ9CXH3 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
3300002I08RikQ9CXH3 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
3300002I08RikQ9CXH3 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
3300002I08RikQ9CXH3 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
3300002I08RikQ9CXH3 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
3300002I08RikQ9CXH3 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
3300002I08RikQ9CXH3 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
3300002I08RikQ9CXH3 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
3300002I08RikQ9CXH3 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
3300002I08RikQ9CXH3 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
3300002I08RikQ9CXH3 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
3300002I08RikQ9CXH3 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
3300002I08RikQ9CXH3 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
3300002I08RikQ9CXH3 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.95■□□□□ 0.46
3300002I08RikQ9CXH3 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
3300002I08RikQ9CXH3 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
3300002I08RikQ9CXH3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
3300002I08RikQ9CXH3 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
3300002I08RikQ9CXH3 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
3300002I08RikQ9CXH3 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
3300002I08RikQ9CXH3 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
3300002I08RikQ9CXH3 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
3300002I08RikQ9CXH3 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.94■□□□□ 0.46
3300002I08RikQ9CXH3 Gm11249-201ENSMUST00000117071 859 ntBASIC17.94■□□□□ 0.46
3300002I08RikQ9CXH3 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.94■□□□□ 0.46
3300002I08RikQ9CXH3 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
3300002I08RikQ9CXH3 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
3300002I08RikQ9CXH3 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
3300002I08RikQ9CXH3 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
3300002I08RikQ9CXH3 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
3300002I08RikQ9CXH3 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
3300002I08RikQ9CXH3 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
3300002I08RikQ9CXH3 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
3300002I08RikQ9CXH3 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.93■□□□□ 0.46
3300002I08RikQ9CXH3 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
3300002I08RikQ9CXH3 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
3300002I08RikQ9CXH3 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
3300002I08RikQ9CXH3 Gm2399-201ENSMUST00000104944 225 ntBASIC17.93■□□□□ 0.46
3300002I08RikQ9CXH3 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
3300002I08RikQ9CXH3 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
3300002I08RikQ9CXH3 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.93■□□□□ 0.46
3300002I08RikQ9CXH3 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.93■□□□□ 0.46
3300002I08RikQ9CXH3 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
3300002I08RikQ9CXH3 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
3300002I08RikQ9CXH3 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
3300002I08RikQ9CXH3 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
3300002I08RikQ9CXH3 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
3300002I08RikQ9CXH3 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
3300002I08RikQ9CXH3 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.92■□□□□ 0.46
3300002I08RikQ9CXH3 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.92■□□□□ 0.46
3300002I08RikQ9CXH3 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
3300002I08RikQ9CXH3 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
3300002I08RikQ9CXH3 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
3300002I08RikQ9CXH3 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
3300002I08RikQ9CXH3 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
3300002I08RikQ9CXH3 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
3300002I08RikQ9CXH3 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
3300002I08RikQ9CXH3 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
3300002I08RikQ9CXH3 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
3300002I08RikQ9CXH3 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
3300002I08RikQ9CXH3 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
3300002I08RikQ9CXH3 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
3300002I08RikQ9CXH3 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
3300002I08RikQ9CXH3 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.91■□□□□ 0.46
3300002I08RikQ9CXH3 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.91■□□□□ 0.46
3300002I08RikQ9CXH3 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.91■□□□□ 0.46
3300002I08RikQ9CXH3 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
3300002I08RikQ9CXH3 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
3300002I08RikQ9CXH3 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
3300002I08RikQ9CXH3 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.91■□□□□ 0.46
3300002I08RikQ9CXH3 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
3300002I08RikQ9CXH3 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
3300002I08RikQ9CXH3 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
3300002I08RikQ9CXH3 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
3300002I08RikQ9CXH3 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
3300002I08RikQ9CXH3 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
3300002I08RikQ9CXH3 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
3300002I08RikQ9CXH3 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
3300002I08RikQ9CXH3 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
3300002I08RikQ9CXH3 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
3300002I08RikQ9CXH3 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
3300002I08RikQ9CXH3 Gm5643-201ENSMUST00000117081 966 ntBASIC17.9■□□□□ 0.46
3300002I08RikQ9CXH3 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
3300002I08RikQ9CXH3 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
3300002I08RikQ9CXH3 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
3300002I08RikQ9CXH3 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
3300002I08RikQ9CXH3 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
3300002I08RikQ9CXH3 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
3300002I08RikQ9CXH3 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
3300002I08RikQ9CXH3 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
3300002I08RikQ9CXH3 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms