Protein–RNA interactions for Protein: Q9CR46

Ska2, Spindle and kinetochore-associated protein 2, mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska2Q9CR46 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ska2Q9CR46 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ska2Q9CR46 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Ska2Q9CR46 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ska2Q9CR46 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ska2Q9CR46 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ska2Q9CR46 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ska2Q9CR46 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ska2Q9CR46 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ska2Q9CR46 Mir5133-201ENSMUST00000174955 77 ntBASIC18.66■□□□□ 0.58
Ska2Q9CR46 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.66■□□□□ 0.58
Ska2Q9CR46 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Ska2Q9CR46 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ska2Q9CR46 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.66■□□□□ 0.58
Ska2Q9CR46 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.66■□□□□ 0.58
Ska2Q9CR46 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ska2Q9CR46 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ska2Q9CR46 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ska2Q9CR46 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ska2Q9CR46 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ska2Q9CR46 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ska2Q9CR46 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ska2Q9CR46 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ska2Q9CR46 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ska2Q9CR46 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ska2Q9CR46 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ska2Q9CR46 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ska2Q9CR46 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ska2Q9CR46 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Ska2Q9CR46 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ska2Q9CR46 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.65■□□□□ 0.58
Ska2Q9CR46 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Ska2Q9CR46 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Ska2Q9CR46 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Ska2Q9CR46 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ska2Q9CR46 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ska2Q9CR46 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ska2Q9CR46 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ska2Q9CR46 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ska2Q9CR46 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ska2Q9CR46 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ska2Q9CR46 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Ska2Q9CR46 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ska2Q9CR46 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ska2Q9CR46 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ska2Q9CR46 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ska2Q9CR46 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ska2Q9CR46 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ska2Q9CR46 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ska2Q9CR46 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.64■□□□□ 0.57
Ska2Q9CR46 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ska2Q9CR46 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Ska2Q9CR46 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ska2Q9CR46 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ska2Q9CR46 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ska2Q9CR46 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ska2Q9CR46 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ska2Q9CR46 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ska2Q9CR46 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ska2Q9CR46 Gm7290-201ENSMUST00000104990 617 ntBASIC18.63■□□□□ 0.57
Ska2Q9CR46 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.63■□□□□ 0.57
Ska2Q9CR46 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ska2Q9CR46 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ska2Q9CR46 Gm12918-201ENSMUST00000120234 636 ntBASIC18.63■□□□□ 0.57
Ska2Q9CR46 Gm15710-201ENSMUST00000121821 636 ntBASIC18.63■□□□□ 0.57
Ska2Q9CR46 Gm5075-201ENSMUST00000196916 622 ntBASIC18.63■□□□□ 0.57
Ska2Q9CR46 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Ska2Q9CR46 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.63■□□□□ 0.57
Ska2Q9CR46 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.63■□□□□ 0.57
Ska2Q9CR46 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ska2Q9CR46 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ska2Q9CR46 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ska2Q9CR46 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ska2Q9CR46 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Ska2Q9CR46 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ska2Q9CR46 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ska2Q9CR46 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ska2Q9CR46 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ska2Q9CR46 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ska2Q9CR46 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.63■□□□□ 0.57
Ska2Q9CR46 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ska2Q9CR46 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ska2Q9CR46 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Ska2Q9CR46 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ska2Q9CR46 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.62■□□□□ 0.57
Ska2Q9CR46 Gm12933-201ENSMUST00000120203 872 ntBASIC18.62■□□□□ 0.57
Ska2Q9CR46 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Ska2Q9CR46 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.62■□□□□ 0.57
Ska2Q9CR46 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ska2Q9CR46 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ska2Q9CR46 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Ska2Q9CR46 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ska2Q9CR46 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ska2Q9CR46 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ska2Q9CR46 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ska2Q9CR46 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ska2Q9CR46 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ska2Q9CR46 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ska2Q9CR46 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Ska2Q9CR46 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms