Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.03■□□□□ -0
RTRAFQ9CQE8 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
RTRAFQ9CQE8 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RTRAFQ9CQE8 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.03■□□□□ -0
RTRAFQ9CQE8 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.03■□□□□ -0
RTRAFQ9CQE8 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
RTRAFQ9CQE8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.03■□□□□ -0
RTRAFQ9CQE8 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RTRAFQ9CQE8 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15.02■□□□□ -0
RTRAFQ9CQE8 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RTRAFQ9CQE8 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RTRAFQ9CQE8 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
RTRAFQ9CQE8 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.02■□□□□ -0
RTRAFQ9CQE8 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
RTRAFQ9CQE8 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC15.02■□□□□ -0
RTRAFQ9CQE8 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC15.02■□□□□ -0
RTRAFQ9CQE8 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC15.02■□□□□ -0
RTRAFQ9CQE8 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC15.02■□□□□ -0
RTRAFQ9CQE8 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC15.02■□□□□ -0
RTRAFQ9CQE8 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RTRAFQ9CQE8 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RTRAFQ9CQE8 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RTRAFQ9CQE8 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RTRAFQ9CQE8 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RTRAFQ9CQE8 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RTRAFQ9CQE8 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RTRAFQ9CQE8 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RTRAFQ9CQE8 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
RTRAFQ9CQE8 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RTRAFQ9CQE8 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RTRAFQ9CQE8 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RTRAFQ9CQE8 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RTRAFQ9CQE8 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RTRAFQ9CQE8 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RTRAFQ9CQE8 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
RTRAFQ9CQE8 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RTRAFQ9CQE8 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC15.01□□□□□ -0.01
RTRAFQ9CQE8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC15.01□□□□□ -0.01
RTRAFQ9CQE8 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RTRAFQ9CQE8 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RTRAFQ9CQE8 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RTRAFQ9CQE8 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
RTRAFQ9CQE8 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RTRAFQ9CQE8 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
RTRAFQ9CQE8 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RTRAFQ9CQE8 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RTRAFQ9CQE8 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
RTRAFQ9CQE8 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
RTRAFQ9CQE8 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
RTRAFQ9CQE8 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15□□□□□ -0.01
RTRAFQ9CQE8 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15□□□□□ -0.01
RTRAFQ9CQE8 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
RTRAFQ9CQE8 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RTRAFQ9CQE8 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RTRAFQ9CQE8 Gm10232-201ENSMUST00000089221 720 ntBASIC15□□□□□ -0.01
RTRAFQ9CQE8 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
RTRAFQ9CQE8 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RTRAFQ9CQE8 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RTRAFQ9CQE8 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15□□□□□ -0.01
RTRAFQ9CQE8 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RTRAFQ9CQE8 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RTRAFQ9CQE8 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RTRAFQ9CQE8 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RTRAFQ9CQE8 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RTRAFQ9CQE8 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC14.99□□□□□ -0.01
RTRAFQ9CQE8 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RTRAFQ9CQE8 Etf1-202ENSMUST00000180351 108 ntBASIC14.99□□□□□ -0.01
RTRAFQ9CQE8 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC14.99□□□□□ -0.01
RTRAFQ9CQE8 AC154266.1-201ENSMUST00000223190 503 ntBASIC14.99□□□□□ -0.01
RTRAFQ9CQE8 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.99□□□□□ -0.01
RTRAFQ9CQE8 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RTRAFQ9CQE8 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RTRAFQ9CQE8 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RTRAFQ9CQE8 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RTRAFQ9CQE8 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RTRAFQ9CQE8 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
RTRAFQ9CQE8 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC14.98□□□□□ -0.01
RTRAFQ9CQE8 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RTRAFQ9CQE8 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RTRAFQ9CQE8 Gm7856-201ENSMUST00000117514 1493 ntBASIC14.98□□□□□ -0.01
RTRAFQ9CQE8 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RTRAFQ9CQE8 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
RTRAFQ9CQE8 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RTRAFQ9CQE8 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RTRAFQ9CQE8 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RTRAFQ9CQE8 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RTRAFQ9CQE8 Gm32699-201ENSMUST00000221728 1988 ntBASIC14.98□□□□□ -0.01
RTRAFQ9CQE8 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RTRAFQ9CQE8 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RTRAFQ9CQE8 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.98□□□□□ -0.01
RTRAFQ9CQE8 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.97□□□□□ -0.01
RTRAFQ9CQE8 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
RTRAFQ9CQE8 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
RTRAFQ9CQE8 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC14.97□□□□□ -0.01
RTRAFQ9CQE8 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RTRAFQ9CQE8 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RTRAFQ9CQE8 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RTRAFQ9CQE8 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RTRAFQ9CQE8 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RTRAFQ9CQE8 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms