Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcc1Q99LI2 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Clcc1Q99LI2 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.18■□□□□ 0.5
Clcc1Q99LI2 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcc1Q99LI2 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcc1Q99LI2 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Clcc1Q99LI2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.18■□□□□ 0.5
Clcc1Q99LI2 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcc1Q99LI2 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcc1Q99LI2 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clcc1Q99LI2 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
Clcc1Q99LI2 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Clcc1Q99LI2 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clcc1Q99LI2 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clcc1Q99LI2 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clcc1Q99LI2 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clcc1Q99LI2 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.17■□□□□ 0.5
Clcc1Q99LI2 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Clcc1Q99LI2 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clcc1Q99LI2 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clcc1Q99LI2 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clcc1Q99LI2 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clcc1Q99LI2 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clcc1Q99LI2 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
Clcc1Q99LI2 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clcc1Q99LI2 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clcc1Q99LI2 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.16■□□□□ 0.5
Clcc1Q99LI2 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clcc1Q99LI2 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clcc1Q99LI2 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clcc1Q99LI2 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clcc1Q99LI2 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clcc1Q99LI2 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Clcc1Q99LI2 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clcc1Q99LI2 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Clcc1Q99LI2 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clcc1Q99LI2 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clcc1Q99LI2 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clcc1Q99LI2 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clcc1Q99LI2 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clcc1Q99LI2 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Clcc1Q99LI2 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Clcc1Q99LI2 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.15■□□□□ 0.5
Clcc1Q99LI2 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.15■□□□□ 0.5
Clcc1Q99LI2 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Clcc1Q99LI2 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clcc1Q99LI2 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clcc1Q99LI2 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clcc1Q99LI2 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcc1Q99LI2 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcc1Q99LI2 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcc1Q99LI2 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcc1Q99LI2 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcc1Q99LI2 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.14■□□□□ 0.49
Clcc1Q99LI2 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcc1Q99LI2 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcc1Q99LI2 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcc1Q99LI2 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.14■□□□□ 0.49
Clcc1Q99LI2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Clcc1Q99LI2 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clcc1Q99LI2 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clcc1Q99LI2 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clcc1Q99LI2 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Clcc1Q99LI2 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.13■□□□□ 0.49
Clcc1Q99LI2 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Clcc1Q99LI2 Gm44549-201ENSMUST00000208351 577 ntBASIC18.13■□□□□ 0.49
Clcc1Q99LI2 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.13■□□□□ 0.49
Clcc1Q99LI2 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.13■□□□□ 0.49
Clcc1Q99LI2 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Clcc1Q99LI2 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clcc1Q99LI2 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Clcc1Q99LI2 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clcc1Q99LI2 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clcc1Q99LI2 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clcc1Q99LI2 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clcc1Q99LI2 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.12■□□□□ 0.49
Clcc1Q99LI2 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clcc1Q99LI2 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clcc1Q99LI2 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clcc1Q99LI2 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clcc1Q99LI2 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clcc1Q99LI2 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clcc1Q99LI2 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.12■□□□□ 0.49
Clcc1Q99LI2 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clcc1Q99LI2 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Clcc1Q99LI2 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Clcc1Q99LI2 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Clcc1Q99LI2 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.11■□□□□ 0.49
Clcc1Q99LI2 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcc1Q99LI2 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcc1Q99LI2 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcc1Q99LI2 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcc1Q99LI2 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.11■□□□□ 0.49
Clcc1Q99LI2 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Clcc1Q99LI2 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcc1Q99LI2 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Clcc1Q99LI2 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clcc1Q99LI2 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Clcc1Q99LI2 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Clcc1Q99LI2 Dio3-201ENSMUST00000097228 1449 ntBASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms