Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp1aQ921W0 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Chmp1aQ921W0 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Chmp1aQ921W0 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.22■□□□□ 0.19
Chmp1aQ921W0 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp1aQ921W0 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
Chmp1aQ921W0 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp1aQ921W0 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp1aQ921W0 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.21■□□□□ 0.19
Chmp1aQ921W0 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp1aQ921W0 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Chmp1aQ921W0 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp1aQ921W0 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp1aQ921W0 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp1aQ921W0 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp1aQ921W0 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp1aQ921W0 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC16.21■□□□□ 0.19
Chmp1aQ921W0 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC16.21■□□□□ 0.19
Chmp1aQ921W0 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp1aQ921W0 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Chmp1aQ921W0 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp1aQ921W0 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp1aQ921W0 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp1aQ921W0 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.21■□□□□ 0.19
Chmp1aQ921W0 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Chmp1aQ921W0 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Chmp1aQ921W0 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Chmp1aQ921W0 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Chmp1aQ921W0 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp1aQ921W0 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp1aQ921W0 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp1aQ921W0 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp1aQ921W0 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp1aQ921W0 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp1aQ921W0 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Chmp1aQ921W0 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Chmp1aQ921W0 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp1aQ921W0 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp1aQ921W0 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Chmp1aQ921W0 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp1aQ921W0 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp1aQ921W0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp1aQ921W0 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp1aQ921W0 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp1aQ921W0 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.19■□□□□ 0.18
Chmp1aQ921W0 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp1aQ921W0 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp1aQ921W0 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp1aQ921W0 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp1aQ921W0 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp1aQ921W0 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp1aQ921W0 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Chmp1aQ921W0 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp1aQ921W0 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp1aQ921W0 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp1aQ921W0 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp1aQ921W0 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp1aQ921W0 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp1aQ921W0 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp1aQ921W0 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp1aQ921W0 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp1aQ921W0 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Chmp1aQ921W0 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
Chmp1aQ921W0 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp1aQ921W0 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp1aQ921W0 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp1aQ921W0 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC16.18■□□□□ 0.18
Chmp1aQ921W0 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp1aQ921W0 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp1aQ921W0 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp1aQ921W0 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp1aQ921W0 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp1aQ921W0 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp1aQ921W0 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp1aQ921W0 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp1aQ921W0 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp1aQ921W0 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
Chmp1aQ921W0 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp1aQ921W0 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp1aQ921W0 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp1aQ921W0 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp1aQ921W0 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp1aQ921W0 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp1aQ921W0 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Chmp1aQ921W0 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp1aQ921W0 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp1aQ921W0 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp1aQ921W0 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp1aQ921W0 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp1aQ921W0 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp1aQ921W0 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp1aQ921W0 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp1aQ921W0 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp1aQ921W0 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp1aQ921W0 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC16.16■□□□□ 0.18
Chmp1aQ921W0 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp1aQ921W0 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Chmp1aQ921W0 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp1aQ921W0 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Chmp1aQ921W0 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms