Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Pcdhb5Q91XZ5 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb5Q91XZ5 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Pcdhb5Q91XZ5 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC21.73■■□□□ 1.07
Pcdhb5Q91XZ5 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Pcdhb5Q91XZ5 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC21.73■■□□□ 1.07
Pcdhb5Q91XZ5 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Pcdhb5Q91XZ5 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb5Q91XZ5 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb5Q91XZ5 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb5Q91XZ5 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb5Q91XZ5 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC21.73■■□□□ 1.07
Pcdhb5Q91XZ5 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb5Q91XZ5 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb5Q91XZ5 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb5Q91XZ5 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb5Q91XZ5 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb5Q91XZ5 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Pcdhb5Q91XZ5 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb5Q91XZ5 Gm10138-203ENSMUST00000206952 366 ntBASIC21.72■■□□□ 1.07
Pcdhb5Q91XZ5 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Pcdhb5Q91XZ5 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb5Q91XZ5 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb5Q91XZ5 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb5Q91XZ5 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb5Q91XZ5 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb5Q91XZ5 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb5Q91XZ5 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb5Q91XZ5 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb5Q91XZ5 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb5Q91XZ5 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb5Q91XZ5 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Pcdhb5Q91XZ5 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb5Q91XZ5 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC21.71■■□□□ 1.07
Pcdhb5Q91XZ5 Gm29994-201ENSMUST00000195495 1193 ntBASIC21.71■■□□□ 1.07
Pcdhb5Q91XZ5 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb5Q91XZ5 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb5Q91XZ5 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
Pcdhb5Q91XZ5 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb5Q91XZ5 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Pcdhb5Q91XZ5 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb5Q91XZ5 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.7■■□□□ 1.07
Pcdhb5Q91XZ5 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb5Q91XZ5 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb5Q91XZ5 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb5Q91XZ5 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb5Q91XZ5 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb5Q91XZ5 Gm18688-201ENSMUST00000204695 1859 ntBASIC21.7■■□□□ 1.06
Pcdhb5Q91XZ5 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb5Q91XZ5 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb5Q91XZ5 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb5Q91XZ5 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb5Q91XZ5 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb5Q91XZ5 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb5Q91XZ5 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb5Q91XZ5 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Pcdhb5Q91XZ5 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb5Q91XZ5 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
Pcdhb5Q91XZ5 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC21.69■■□□□ 1.06
Pcdhb5Q91XZ5 Mir5122-201ENSMUST00000175004 89 ntBASIC21.69■■□□□ 1.06
Pcdhb5Q91XZ5 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb5Q91XZ5 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb5Q91XZ5 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb5Q91XZ5 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb5Q91XZ5 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb5Q91XZ5 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb5Q91XZ5 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC21.68■■□□□ 1.06
Pcdhb5Q91XZ5 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb5Q91XZ5 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC21.68■■□□□ 1.06
Pcdhb5Q91XZ5 Gm38285-201ENSMUST00000192928 922 ntBASIC21.68■■□□□ 1.06
Pcdhb5Q91XZ5 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC21.68■■□□□ 1.06
Pcdhb5Q91XZ5 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb5Q91XZ5 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC21.68■■□□□ 1.06
Pcdhb5Q91XZ5 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
Pcdhb5Q91XZ5 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb5Q91XZ5 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.67■■□□□ 1.06
Pcdhb5Q91XZ5 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb5Q91XZ5 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Pcdhb5Q91XZ5 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb5Q91XZ5 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb5Q91XZ5 Gm43183-201ENSMUST00000200632 547 ntBASIC21.67■■□□□ 1.06
Pcdhb5Q91XZ5 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb5Q91XZ5 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb5Q91XZ5 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb5Q91XZ5 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb5Q91XZ5 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Pcdhb5Q91XZ5 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb5Q91XZ5 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb5Q91XZ5 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb5Q91XZ5 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb5Q91XZ5 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb5Q91XZ5 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb5Q91XZ5 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb5Q91XZ5 Gm15375-201ENSMUST00000119510 849 ntBASIC21.66■■□□□ 1.06
Pcdhb5Q91XZ5 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Pcdhb5Q91XZ5 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC21.66■■□□□ 1.06
Pcdhb5Q91XZ5 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb5Q91XZ5 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb5Q91XZ5 AC175538.1-201ENSMUST00000225343 1269 ntBASIC21.66■■□□□ 1.06
Pcdhb5Q91XZ5 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms