Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga4Q91XY4 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Pcdhga4Q91XY4 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga4Q91XY4 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga4Q91XY4 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.04■□□□□ 0.48
Pcdhga4Q91XY4 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Pcdhga4Q91XY4 Gm29257-201ENSMUST00000186115 639 ntBASIC18.04■□□□□ 0.48
Pcdhga4Q91XY4 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga4Q91XY4 Gm6365-201ENSMUST00000054711 744 ntBASIC18.04■□□□□ 0.48
Pcdhga4Q91XY4 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga4Q91XY4 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga4Q91XY4 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga4Q91XY4 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga4Q91XY4 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga4Q91XY4 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga4Q91XY4 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga4Q91XY4 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga4Q91XY4 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga4Q91XY4 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga4Q91XY4 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga4Q91XY4 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga4Q91XY4 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga4Q91XY4 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.03■□□□□ 0.48
Pcdhga4Q91XY4 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga4Q91XY4 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga4Q91XY4 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga4Q91XY4 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga4Q91XY4 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga4Q91XY4 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Pcdhga4Q91XY4 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Pcdhga4Q91XY4 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Pcdhga4Q91XY4 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhga4Q91XY4 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhga4Q91XY4 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Pcdhga4Q91XY4 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhga4Q91XY4 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhga4Q91XY4 Nespas-201ENSMUST00000143738 1083 ntBASIC18.02■□□□□ 0.48
Pcdhga4Q91XY4 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.02■□□□□ 0.48
Pcdhga4Q91XY4 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.02■□□□□ 0.48
Pcdhga4Q91XY4 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhga4Q91XY4 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.02■□□□□ 0.48
Pcdhga4Q91XY4 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhga4Q91XY4 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Pcdhga4Q91XY4 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhga4Q91XY4 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhga4Q91XY4 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
Pcdhga4Q91XY4 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhga4Q91XY4 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhga4Q91XY4 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhga4Q91XY4 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhga4Q91XY4 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhga4Q91XY4 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhga4Q91XY4 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhga4Q91XY4 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhga4Q91XY4 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhga4Q91XY4 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhga4Q91XY4 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhga4Q91XY4 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhga4Q91XY4 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Pcdhga4Q91XY4 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhga4Q91XY4 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.01■□□□□ 0.47
Pcdhga4Q91XY4 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhga4Q91XY4 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhga4Q91XY4 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhga4Q91XY4 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhga4Q91XY4 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhga4Q91XY4 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhga4Q91XY4 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhga4Q91XY4 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhga4Q91XY4 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Pcdhga4Q91XY4 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhga4Q91XY4 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhga4Q91XY4 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhga4Q91XY4 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
Pcdhga4Q91XY4 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhga4Q91XY4 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhga4Q91XY4 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
Pcdhga4Q91XY4 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhga4Q91XY4 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhga4Q91XY4 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhga4Q91XY4 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhga4Q91XY4 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhga4Q91XY4 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhga4Q91XY4 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhga4Q91XY4 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Pcdhga4Q91XY4 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhga4Q91XY4 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
Pcdhga4Q91XY4 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhga4Q91XY4 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhga4Q91XY4 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhga4Q91XY4 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhga4Q91XY4 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhga4Q91XY4 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhga4Q91XY4 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhga4Q91XY4 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhga4Q91XY4 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.99■□□□□ 0.47
Pcdhga4Q91XY4 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhga4Q91XY4 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhga4Q91XY4 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Pcdhga4Q91XY4 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms