Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trex1Q91XB0 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trex1Q91XB0 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Trex1Q91XB0 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trex1Q91XB0 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC21.16■□□□□ 0.98
Trex1Q91XB0 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Trex1Q91XB0 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Trex1Q91XB0 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trex1Q91XB0 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trex1Q91XB0 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trex1Q91XB0 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
Trex1Q91XB0 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trex1Q91XB0 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trex1Q91XB0 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trex1Q91XB0 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trex1Q91XB0 Gm13836-201ENSMUST00000121159 501 ntBASIC21.15■□□□□ 0.98
Trex1Q91XB0 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trex1Q91XB0 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC21.15■□□□□ 0.98
Trex1Q91XB0 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trex1Q91XB0 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trex1Q91XB0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Trex1Q91XB0 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trex1Q91XB0 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trex1Q91XB0 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trex1Q91XB0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
Trex1Q91XB0 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trex1Q91XB0 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trex1Q91XB0 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Trex1Q91XB0 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trex1Q91XB0 Gm37805-201ENSMUST00000192612 1094 ntBASIC21.14■□□□□ 0.97
Trex1Q91XB0 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trex1Q91XB0 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Trex1Q91XB0 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trex1Q91XB0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Trex1Q91XB0 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Trex1Q91XB0 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trex1Q91XB0 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Trex1Q91XB0 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Trex1Q91XB0 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trex1Q91XB0 Gm7977-201ENSMUST00000193787 748 ntBASIC21.13■□□□□ 0.97
Trex1Q91XB0 Gm10138-203ENSMUST00000206952 366 ntBASIC21.13■□□□□ 0.97
Trex1Q91XB0 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trex1Q91XB0 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
Trex1Q91XB0 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trex1Q91XB0 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trex1Q91XB0 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Trex1Q91XB0 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trex1Q91XB0 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trex1Q91XB0 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trex1Q91XB0 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Trex1Q91XB0 Mir5122-201ENSMUST00000175004 89 ntBASIC21.12■□□□□ 0.97
Trex1Q91XB0 Gm38285-201ENSMUST00000192928 922 ntBASIC21.12■□□□□ 0.97
Trex1Q91XB0 Gm29994-201ENSMUST00000195495 1193 ntBASIC21.12■□□□□ 0.97
Trex1Q91XB0 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC21.12■□□□□ 0.97
Trex1Q91XB0 AC175538.1-201ENSMUST00000225343 1269 ntBASIC21.12■□□□□ 0.97
Trex1Q91XB0 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Trex1Q91XB0 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trex1Q91XB0 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trex1Q91XB0 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trex1Q91XB0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trex1Q91XB0 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trex1Q91XB0 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC21.11■□□□□ 0.97
Trex1Q91XB0 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Trex1Q91XB0 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC21.11■□□□□ 0.97
Trex1Q91XB0 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
Trex1Q91XB0 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trex1Q91XB0 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
Trex1Q91XB0 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trex1Q91XB0 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trex1Q91XB0 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trex1Q91XB0 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Trex1Q91XB0 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC21.1■□□□□ 0.97
Trex1Q91XB0 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trex1Q91XB0 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trex1Q91XB0 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC21.1■□□□□ 0.97
Trex1Q91XB0 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC21.1■□□□□ 0.97
Trex1Q91XB0 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Trex1Q91XB0 Gm43183-201ENSMUST00000200632 547 ntBASIC21.1■□□□□ 0.97
Trex1Q91XB0 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trex1Q91XB0 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC21.09■□□□□ 0.97
Trex1Q91XB0 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Trex1Q91XB0 Gm45560-201ENSMUST00000211492 1472 ntBASIC21.09■□□□□ 0.97
Trex1Q91XB0 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Trex1Q91XB0 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trex1Q91XB0 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trex1Q91XB0 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
Trex1Q91XB0 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trex1Q91XB0 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
Trex1Q91XB0 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trex1Q91XB0 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trex1Q91XB0 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trex1Q91XB0 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Trex1Q91XB0 Gm15375-201ENSMUST00000119510 849 ntBASIC21.08■□□□□ 0.97
Trex1Q91XB0 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Trex1Q91XB0 Gm20472-201ENSMUST00000174403 1240 ntBASIC21.08■□□□□ 0.97
Trex1Q91XB0 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trex1Q91XB0 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Trex1Q91XB0 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trex1Q91XB0 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trex1Q91XB0 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms