Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC23.59■■□□□ 1.37
Chmp7Q8R1T1 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
Chmp7Q8R1T1 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Chmp7Q8R1T1 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC23.59■■□□□ 1.37
Chmp7Q8R1T1 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Chmp7Q8R1T1 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Chmp7Q8R1T1 AC175538.1-201ENSMUST00000225343 1269 ntBASIC23.59■■□□□ 1.37
Chmp7Q8R1T1 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Chmp7Q8R1T1 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Chmp7Q8R1T1 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Chmp7Q8R1T1 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
Chmp7Q8R1T1 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Chmp7Q8R1T1 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
Chmp7Q8R1T1 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Chmp7Q8R1T1 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Chmp7Q8R1T1 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC23.58■■□□□ 1.37
Chmp7Q8R1T1 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Chmp7Q8R1T1 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
Chmp7Q8R1T1 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
Chmp7Q8R1T1 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
Chmp7Q8R1T1 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Chmp7Q8R1T1 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC23.58■■□□□ 1.37
Chmp7Q8R1T1 Gm20472-201ENSMUST00000174403 1240 ntBASIC23.58■■□□□ 1.37
Chmp7Q8R1T1 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
Chmp7Q8R1T1 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Chmp7Q8R1T1 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
Chmp7Q8R1T1 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
Chmp7Q8R1T1 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Chmp7Q8R1T1 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
Chmp7Q8R1T1 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
Chmp7Q8R1T1 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Chmp7Q8R1T1 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Chmp7Q8R1T1 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Chmp7Q8R1T1 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Chmp7Q8R1T1 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC23.57■■□□□ 1.36
Chmp7Q8R1T1 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Chmp7Q8R1T1 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Chmp7Q8R1T1 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC23.57■■□□□ 1.36
Chmp7Q8R1T1 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC23.57■■□□□ 1.36
Chmp7Q8R1T1 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Chmp7Q8R1T1 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Chmp7Q8R1T1 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC23.57■■□□□ 1.36
Chmp7Q8R1T1 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Chmp7Q8R1T1 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Chmp7Q8R1T1 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC23.56■■□□□ 1.36
Chmp7Q8R1T1 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Chmp7Q8R1T1 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Chmp7Q8R1T1 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Chmp7Q8R1T1 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Chmp7Q8R1T1 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Chmp7Q8R1T1 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Chmp7Q8R1T1 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Chmp7Q8R1T1 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Chmp7Q8R1T1 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Chmp7Q8R1T1 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Chmp7Q8R1T1 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Chmp7Q8R1T1 Gm15375-201ENSMUST00000119510 849 ntBASIC23.55■■□□□ 1.36
Chmp7Q8R1T1 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
Chmp7Q8R1T1 Gm43183-201ENSMUST00000200632 547 ntBASIC23.55■■□□□ 1.36
Chmp7Q8R1T1 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC23.55■■□□□ 1.36
Chmp7Q8R1T1 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Chmp7Q8R1T1 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Chmp7Q8R1T1 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
Chmp7Q8R1T1 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Chmp7Q8R1T1 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
Chmp7Q8R1T1 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Chmp7Q8R1T1 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Chmp7Q8R1T1 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Chmp7Q8R1T1 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Chmp7Q8R1T1 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Chmp7Q8R1T1 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Chmp7Q8R1T1 Gm38285-201ENSMUST00000192928 922 ntBASIC23.54■■□□□ 1.36
Chmp7Q8R1T1 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC23.54■■□□□ 1.36
Chmp7Q8R1T1 Gm5417-201ENSMUST00000079706 384 ntBASIC23.54■■□□□ 1.36
Chmp7Q8R1T1 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Chmp7Q8R1T1 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
Chmp7Q8R1T1 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Chmp7Q8R1T1 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Chmp7Q8R1T1 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Chmp7Q8R1T1 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
Chmp7Q8R1T1 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Chmp7Q8R1T1 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
Chmp7Q8R1T1 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
Chmp7Q8R1T1 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Chmp7Q8R1T1 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Chmp7Q8R1T1 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Chmp7Q8R1T1 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Chmp7Q8R1T1 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Chmp7Q8R1T1 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Chmp7Q8R1T1 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Chmp7Q8R1T1 Gm45560-201ENSMUST00000211492 1472 ntBASIC23.52■■□□□ 1.36
Chmp7Q8R1T1 Gm11643-201ENSMUST00000119578 864 ntBASIC23.52■■□□□ 1.36
Chmp7Q8R1T1 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC23.52■■□□□ 1.36
Chmp7Q8R1T1 AC153881.2-201ENSMUST00000214877 204 ntBASIC23.52■■□□□ 1.36
Chmp7Q8R1T1 Gm18025-201ENSMUST00000221733 862 ntBASIC23.52■■□□□ 1.36
Chmp7Q8R1T1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Chmp7Q8R1T1 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC23.52■■□□□ 1.36
Chmp7Q8R1T1 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Chmp7Q8R1T1 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Chmp7Q8R1T1 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms