Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Zcchc9Q8R1J3 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Zcchc9Q8R1J3 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Zcchc9Q8R1J3 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Zcchc9Q8R1J3 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Zcchc9Q8R1J3 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Zcchc9Q8R1J3 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
Zcchc9Q8R1J3 Gm6576-201ENSMUST00000169678 883 ntBASIC18.29■□□□□ 0.52
Zcchc9Q8R1J3 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Zcchc9Q8R1J3 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Zcchc9Q8R1J3 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Zcchc9Q8R1J3 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
Zcchc9Q8R1J3 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Zcchc9Q8R1J3 Dio3-201ENSMUST00000097228 1449 ntBASIC18.29■□□□□ 0.52
Zcchc9Q8R1J3 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Zcchc9Q8R1J3 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Zcchc9Q8R1J3 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
Zcchc9Q8R1J3 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Zcchc9Q8R1J3 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Zcchc9Q8R1J3 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Zcchc9Q8R1J3 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Zcchc9Q8R1J3 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Zcchc9Q8R1J3 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Zcchc9Q8R1J3 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Zcchc9Q8R1J3 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Zcchc9Q8R1J3 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Zcchc9Q8R1J3 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.28■□□□□ 0.52
Zcchc9Q8R1J3 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Zcchc9Q8R1J3 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Zcchc9Q8R1J3 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Zcchc9Q8R1J3 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Zcchc9Q8R1J3 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Zcchc9Q8R1J3 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Zcchc9Q8R1J3 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Zcchc9Q8R1J3 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Zcchc9Q8R1J3 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Zcchc9Q8R1J3 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Zcchc9Q8R1J3 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.27■□□□□ 0.52
Zcchc9Q8R1J3 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.27■□□□□ 0.52
Zcchc9Q8R1J3 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.27■□□□□ 0.52
Zcchc9Q8R1J3 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Zcchc9Q8R1J3 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Zcchc9Q8R1J3 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Zcchc9Q8R1J3 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Zcchc9Q8R1J3 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Zcchc9Q8R1J3 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Zcchc9Q8R1J3 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Zcchc9Q8R1J3 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.27■□□□□ 0.51
Zcchc9Q8R1J3 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.26■□□□□ 0.51
Zcchc9Q8R1J3 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Zcchc9Q8R1J3 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.26■□□□□ 0.51
Zcchc9Q8R1J3 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.26■□□□□ 0.51
Zcchc9Q8R1J3 Gm44549-201ENSMUST00000208351 577 ntBASIC18.26■□□□□ 0.51
Zcchc9Q8R1J3 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Zcchc9Q8R1J3 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Zcchc9Q8R1J3 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Zcchc9Q8R1J3 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Zcchc9Q8R1J3 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Zcchc9Q8R1J3 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Zcchc9Q8R1J3 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.25■□□□□ 0.51
Zcchc9Q8R1J3 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Zcchc9Q8R1J3 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Zcchc9Q8R1J3 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Zcchc9Q8R1J3 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Zcchc9Q8R1J3 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Zcchc9Q8R1J3 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Zcchc9Q8R1J3 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Zcchc9Q8R1J3 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Zcchc9Q8R1J3 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Zcchc9Q8R1J3 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Zcchc9Q8R1J3 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.25■□□□□ 0.51
Zcchc9Q8R1J3 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.25■□□□□ 0.51
Zcchc9Q8R1J3 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.25■□□□□ 0.51
Zcchc9Q8R1J3 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Zcchc9Q8R1J3 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Zcchc9Q8R1J3 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Zcchc9Q8R1J3 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Zcchc9Q8R1J3 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Zcchc9Q8R1J3 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.24■□□□□ 0.51
Zcchc9Q8R1J3 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.24■□□□□ 0.51
Zcchc9Q8R1J3 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Zcchc9Q8R1J3 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Zcchc9Q8R1J3 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Zcchc9Q8R1J3 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Zcchc9Q8R1J3 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Zcchc9Q8R1J3 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Zcchc9Q8R1J3 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Zcchc9Q8R1J3 Gm11249-201ENSMUST00000117071 859 ntBASIC18.24■□□□□ 0.51
Zcchc9Q8R1J3 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Zcchc9Q8R1J3 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Zcchc9Q8R1J3 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Zcchc9Q8R1J3 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.24■□□□□ 0.51
Zcchc9Q8R1J3 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Zcchc9Q8R1J3 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.24■□□□□ 0.51
Zcchc9Q8R1J3 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Zcchc9Q8R1J3 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Zcchc9Q8R1J3 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Zcchc9Q8R1J3 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Zcchc9Q8R1J3 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Zcchc9Q8R1J3 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms