Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pdlim2Q8R1G6 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pdlim2Q8R1G6 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pdlim2Q8R1G6 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
Pdlim2Q8R1G6 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pdlim2Q8R1G6 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Pdlim2Q8R1G6 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC21.2■□□□□ 0.99
Pdlim2Q8R1G6 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pdlim2Q8R1G6 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Pdlim2Q8R1G6 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC21.2■□□□□ 0.98
Pdlim2Q8R1G6 Hivep3-201ENSMUST00000084306 2973 ntBASIC21.2■□□□□ 0.98
Pdlim2Q8R1G6 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.2■□□□□ 0.98
Pdlim2Q8R1G6 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.2■□□□□ 0.98
Pdlim2Q8R1G6 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pdlim2Q8R1G6 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pdlim2Q8R1G6 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC21.2■□□□□ 0.98
Pdlim2Q8R1G6 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Pdlim2Q8R1G6 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pdlim2Q8R1G6 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pdlim2Q8R1G6 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pdlim2Q8R1G6 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pdlim2Q8R1G6 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pdlim2Q8R1G6 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC21.19■□□□□ 0.98
Pdlim2Q8R1G6 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pdlim2Q8R1G6 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pdlim2Q8R1G6 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC21.18■□□□□ 0.98
Pdlim2Q8R1G6 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pdlim2Q8R1G6 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pdlim2Q8R1G6 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pdlim2Q8R1G6 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pdlim2Q8R1G6 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pdlim2Q8R1G6 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Pdlim2Q8R1G6 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pdlim2Q8R1G6 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pdlim2Q8R1G6 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pdlim2Q8R1G6 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pdlim2Q8R1G6 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pdlim2Q8R1G6 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Pdlim2Q8R1G6 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pdlim2Q8R1G6 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pdlim2Q8R1G6 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Pdlim2Q8R1G6 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC21.17■□□□□ 0.98
Pdlim2Q8R1G6 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pdlim2Q8R1G6 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pdlim2Q8R1G6 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pdlim2Q8R1G6 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.17■□□□□ 0.98
Pdlim2Q8R1G6 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.17■□□□□ 0.98
Pdlim2Q8R1G6 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.17■□□□□ 0.98
Pdlim2Q8R1G6 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pdlim2Q8R1G6 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pdlim2Q8R1G6 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pdlim2Q8R1G6 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pdlim2Q8R1G6 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pdlim2Q8R1G6 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Pdlim2Q8R1G6 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
Pdlim2Q8R1G6 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Pdlim2Q8R1G6 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pdlim2Q8R1G6 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pdlim2Q8R1G6 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC21.16■□□□□ 0.98
Pdlim2Q8R1G6 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pdlim2Q8R1G6 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Pdlim2Q8R1G6 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC21.16■□□□□ 0.98
Pdlim2Q8R1G6 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.16■□□□□ 0.98
Pdlim2Q8R1G6 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pdlim2Q8R1G6 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Pdlim2Q8R1G6 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pdlim2Q8R1G6 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pdlim2Q8R1G6 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC21.15■□□□□ 0.98
Pdlim2Q8R1G6 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pdlim2Q8R1G6 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pdlim2Q8R1G6 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pdlim2Q8R1G6 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pdlim2Q8R1G6 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pdlim2Q8R1G6 Gm43566-201ENSMUST00000196851 808 ntBASIC21.15■□□□□ 0.98
Pdlim2Q8R1G6 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.15■□□□□ 0.98
Pdlim2Q8R1G6 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pdlim2Q8R1G6 Gm9867-201ENSMUST00000192212 2647 ntBASIC21.15■□□□□ 0.98
Pdlim2Q8R1G6 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pdlim2Q8R1G6 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Pdlim2Q8R1G6 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pdlim2Q8R1G6 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC21.14■□□□□ 0.98
Pdlim2Q8R1G6 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pdlim2Q8R1G6 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pdlim2Q8R1G6 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pdlim2Q8R1G6 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pdlim2Q8R1G6 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pdlim2Q8R1G6 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pdlim2Q8R1G6 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pdlim2Q8R1G6 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Pdlim2Q8R1G6 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Pdlim2Q8R1G6 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Pdlim2Q8R1G6 Gm40881-201ENSMUST00000223397 166 ntBASIC21.14■□□□□ 0.97
Pdlim2Q8R1G6 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pdlim2Q8R1G6 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pdlim2Q8R1G6 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pdlim2Q8R1G6 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pdlim2Q8R1G6 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Pdlim2Q8R1G6 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Pdlim2Q8R1G6 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pdlim2Q8R1G6 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms