Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Smc5Q8CG46 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Smc5Q8CG46 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Smc5Q8CG46 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Smc5Q8CG46 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
Smc5Q8CG46 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Smc5Q8CG46 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Smc5Q8CG46 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
Smc5Q8CG46 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC22.83■■□□□ 1.25
Smc5Q8CG46 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC22.83■■□□□ 1.25
Smc5Q8CG46 Fcho2-208ENSMUST00000224992 2964 ntBASIC22.83■■□□□ 1.25
Smc5Q8CG46 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
Smc5Q8CG46 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC22.83■■□□□ 1.25
Smc5Q8CG46 Tgds-204ENSMUST00000228543 1594 ntBASIC22.83■■□□□ 1.25
Smc5Q8CG46 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Smc5Q8CG46 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.24
Smc5Q8CG46 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Smc5Q8CG46 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Smc5Q8CG46 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Smc5Q8CG46 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Smc5Q8CG46 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Smc5Q8CG46 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Smc5Q8CG46 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Smc5Q8CG46 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Smc5Q8CG46 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
Smc5Q8CG46 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC22.81■■□□□ 1.24
Smc5Q8CG46 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
Smc5Q8CG46 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Smc5Q8CG46 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Smc5Q8CG46 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
Smc5Q8CG46 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Smc5Q8CG46 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC22.8■■□□□ 1.24
Smc5Q8CG46 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Smc5Q8CG46 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Smc5Q8CG46 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Smc5Q8CG46 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Smc5Q8CG46 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Smc5Q8CG46 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Smc5Q8CG46 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC22.79■■□□□ 1.24
Smc5Q8CG46 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Smc5Q8CG46 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
Smc5Q8CG46 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Smc5Q8CG46 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
Smc5Q8CG46 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC22.79■■□□□ 1.24
Smc5Q8CG46 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
Smc5Q8CG46 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Smc5Q8CG46 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
Smc5Q8CG46 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Smc5Q8CG46 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Smc5Q8CG46 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Smc5Q8CG46 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
Smc5Q8CG46 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Smc5Q8CG46 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Smc5Q8CG46 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
Smc5Q8CG46 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Smc5Q8CG46 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Smc5Q8CG46 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Smc5Q8CG46 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Smc5Q8CG46 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
Smc5Q8CG46 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Smc5Q8CG46 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC22.77■■□□□ 1.24
Smc5Q8CG46 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Smc5Q8CG46 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Smc5Q8CG46 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Smc5Q8CG46 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Smc5Q8CG46 Gm13534-201ENSMUST00000121169 513 ntBASIC22.77■■□□□ 1.24
Smc5Q8CG46 Gm43060-201ENSMUST00000200621 289 ntBASIC22.77■■□□□ 1.24
Smc5Q8CG46 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
Smc5Q8CG46 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Smc5Q8CG46 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Smc5Q8CG46 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Smc5Q8CG46 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Smc5Q8CG46 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Smc5Q8CG46 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Smc5Q8CG46 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC22.76■■□□□ 1.23
Smc5Q8CG46 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Smc5Q8CG46 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Smc5Q8CG46 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
Smc5Q8CG46 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Smc5Q8CG46 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Smc5Q8CG46 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC22.75■■□□□ 1.23
Smc5Q8CG46 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
Smc5Q8CG46 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Smc5Q8CG46 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Smc5Q8CG46 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Smc5Q8CG46 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Smc5Q8CG46 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Smc5Q8CG46 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Smc5Q8CG46 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC22.75■■□□□ 1.23
Smc5Q8CG46 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC22.74■■□□□ 1.23
Smc5Q8CG46 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Smc5Q8CG46 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Smc5Q8CG46 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
Smc5Q8CG46 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Smc5Q8CG46 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC22.74■■□□□ 1.23
Smc5Q8CG46 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Smc5Q8CG46 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
Smc5Q8CG46 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Smc5Q8CG46 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Smc5Q8CG46 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC22.74■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms