Protein–RNA interactions for Protein: Q8C1C8

Pnma1, Paraneoplastic antigen Ma1 homolog, mousemouse

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pnma1Q8C1C8 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pnma1Q8C1C8 Gm2399-201ENSMUST00000104944 225 ntBASIC20.26■□□□□ 0.83
Pnma1Q8C1C8 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.26■□□□□ 0.83
Pnma1Q8C1C8 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.26■□□□□ 0.83
Pnma1Q8C1C8 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pnma1Q8C1C8 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pnma1Q8C1C8 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pnma1Q8C1C8 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pnma1Q8C1C8 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.26■□□□□ 0.83
Pnma1Q8C1C8 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pnma1Q8C1C8 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.26■□□□□ 0.83
Pnma1Q8C1C8 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pnma1Q8C1C8 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Pnma1Q8C1C8 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pnma1Q8C1C8 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.25■□□□□ 0.83
Pnma1Q8C1C8 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pnma1Q8C1C8 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pnma1Q8C1C8 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pnma1Q8C1C8 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pnma1Q8C1C8 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pnma1Q8C1C8 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Pnma1Q8C1C8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pnma1Q8C1C8 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pnma1Q8C1C8 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.24■□□□□ 0.83
Pnma1Q8C1C8 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pnma1Q8C1C8 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pnma1Q8C1C8 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Pnma1Q8C1C8 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Pnma1Q8C1C8 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Pnma1Q8C1C8 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.24■□□□□ 0.83
Pnma1Q8C1C8 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pnma1Q8C1C8 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Pnma1Q8C1C8 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pnma1Q8C1C8 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pnma1Q8C1C8 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pnma1Q8C1C8 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pnma1Q8C1C8 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pnma1Q8C1C8 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.23■□□□□ 0.83
Pnma1Q8C1C8 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pnma1Q8C1C8 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.23■□□□□ 0.83
Pnma1Q8C1C8 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pnma1Q8C1C8 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Pnma1Q8C1C8 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pnma1Q8C1C8 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pnma1Q8C1C8 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.23■□□□□ 0.83
Pnma1Q8C1C8 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pnma1Q8C1C8 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pnma1Q8C1C8 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pnma1Q8C1C8 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pnma1Q8C1C8 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pnma1Q8C1C8 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pnma1Q8C1C8 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Pnma1Q8C1C8 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pnma1Q8C1C8 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.22■□□□□ 0.83
Pnma1Q8C1C8 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.22■□□□□ 0.83
Pnma1Q8C1C8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.22■□□□□ 0.83
Pnma1Q8C1C8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pnma1Q8C1C8 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pnma1Q8C1C8 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pnma1Q8C1C8 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pnma1Q8C1C8 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.21■□□□□ 0.83
Pnma1Q8C1C8 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pnma1Q8C1C8 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Pnma1Q8C1C8 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pnma1Q8C1C8 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pnma1Q8C1C8 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.21■□□□□ 0.83
Pnma1Q8C1C8 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.21■□□□□ 0.83
Pnma1Q8C1C8 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pnma1Q8C1C8 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pnma1Q8C1C8 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pnma1Q8C1C8 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.2■□□□□ 0.82
Pnma1Q8C1C8 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Pnma1Q8C1C8 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pnma1Q8C1C8 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pnma1Q8C1C8 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.2■□□□□ 0.82
Pnma1Q8C1C8 Gm11249-201ENSMUST00000117071 859 ntBASIC20.2■□□□□ 0.82
Pnma1Q8C1C8 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.2■□□□□ 0.82
Pnma1Q8C1C8 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pnma1Q8C1C8 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pnma1Q8C1C8 Gm8520-201ENSMUST00000186517 868 ntBASIC20.2■□□□□ 0.82
Pnma1Q8C1C8 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.2■□□□□ 0.82
Pnma1Q8C1C8 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pnma1Q8C1C8 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.2■□□□□ 0.82
Pnma1Q8C1C8 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Pnma1Q8C1C8 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pnma1Q8C1C8 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pnma1Q8C1C8 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pnma1Q8C1C8 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pnma1Q8C1C8 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pnma1Q8C1C8 Gm13168-201ENSMUST00000121771 632 ntBASIC20.19■□□□□ 0.82
Pnma1Q8C1C8 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.19■□□□□ 0.82
Pnma1Q8C1C8 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pnma1Q8C1C8 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pnma1Q8C1C8 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pnma1Q8C1C8 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pnma1Q8C1C8 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pnma1Q8C1C8 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pnma1Q8C1C8 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pnma1Q8C1C8 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pnma1Q8C1C8 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms