Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdk5rap1Q8BTW8 Flg-201ENSMUST00000050758 1488 ntBASIC17.43■□□□□ 0.38
Cdk5rap1Q8BTW8 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdk5rap1Q8BTW8 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdk5rap1Q8BTW8 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cdk5rap1Q8BTW8 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdk5rap1Q8BTW8 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Cdk5rap1Q8BTW8 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cdk5rap1Q8BTW8 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.42■□□□□ 0.38
Cdk5rap1Q8BTW8 Gm18666-201ENSMUST00000190039 958 ntBASIC17.42■□□□□ 0.38
Cdk5rap1Q8BTW8 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.42■□□□□ 0.38
Cdk5rap1Q8BTW8 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.42■□□□□ 0.38
Cdk5rap1Q8BTW8 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
Cdk5rap1Q8BTW8 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdk5rap1Q8BTW8 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdk5rap1Q8BTW8 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cdk5rap1Q8BTW8 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
Cdk5rap1Q8BTW8 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cdk5rap1Q8BTW8 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdk5rap1Q8BTW8 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdk5rap1Q8BTW8 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdk5rap1Q8BTW8 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.41■□□□□ 0.38
Cdk5rap1Q8BTW8 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.41■□□□□ 0.38
Cdk5rap1Q8BTW8 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.41■□□□□ 0.38
Cdk5rap1Q8BTW8 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdk5rap1Q8BTW8 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdk5rap1Q8BTW8 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdk5rap1Q8BTW8 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cdk5rap1Q8BTW8 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Cdk5rap1Q8BTW8 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Cdk5rap1Q8BTW8 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cdk5rap1Q8BTW8 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Cdk5rap1Q8BTW8 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Cdk5rap1Q8BTW8 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdk5rap1Q8BTW8 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.4■□□□□ 0.38
Cdk5rap1Q8BTW8 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cdk5rap1Q8BTW8 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cdk5rap1Q8BTW8 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdk5rap1Q8BTW8 Gm5643-201ENSMUST00000117081 966 ntBASIC17.4■□□□□ 0.38
Cdk5rap1Q8BTW8 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.4■□□□□ 0.38
Cdk5rap1Q8BTW8 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cdk5rap1Q8BTW8 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cdk5rap1Q8BTW8 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdk5rap1Q8BTW8 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Cdk5rap1Q8BTW8 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdk5rap1Q8BTW8 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdk5rap1Q8BTW8 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cdk5rap1Q8BTW8 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdk5rap1Q8BTW8 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.4■□□□□ 0.38
Cdk5rap1Q8BTW8 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.38
Cdk5rap1Q8BTW8 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdk5rap1Q8BTW8 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdk5rap1Q8BTW8 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdk5rap1Q8BTW8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdk5rap1Q8BTW8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cdk5rap1Q8BTW8 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdk5rap1Q8BTW8 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
Cdk5rap1Q8BTW8 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cdk5rap1Q8BTW8 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.39■□□□□ 0.37
Cdk5rap1Q8BTW8 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.39■□□□□ 0.37
Cdk5rap1Q8BTW8 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdk5rap1Q8BTW8 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Cdk5rap1Q8BTW8 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cdk5rap1Q8BTW8 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdk5rap1Q8BTW8 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdk5rap1Q8BTW8 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdk5rap1Q8BTW8 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cdk5rap1Q8BTW8 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.38■□□□□ 0.37
Cdk5rap1Q8BTW8 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cdk5rap1Q8BTW8 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.38■□□□□ 0.37
Cdk5rap1Q8BTW8 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdk5rap1Q8BTW8 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cdk5rap1Q8BTW8 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdk5rap1Q8BTW8 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.38■□□□□ 0.37
Cdk5rap1Q8BTW8 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Cdk5rap1Q8BTW8 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdk5rap1Q8BTW8 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk5rap1Q8BTW8 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.37■□□□□ 0.37
Cdk5rap1Q8BTW8 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk5rap1Q8BTW8 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk5rap1Q8BTW8 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk5rap1Q8BTW8 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk5rap1Q8BTW8 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.37■□□□□ 0.37
Cdk5rap1Q8BTW8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Cdk5rap1Q8BTW8 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
Cdk5rap1Q8BTW8 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Cdk5rap1Q8BTW8 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.37■□□□□ 0.37
Cdk5rap1Q8BTW8 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk5rap1Q8BTW8 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk5rap1Q8BTW8 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk5rap1Q8BTW8 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk5rap1Q8BTW8 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Cdk5rap1Q8BTW8 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk5rap1Q8BTW8 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk5rap1Q8BTW8 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk5rap1Q8BTW8 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk5rap1Q8BTW8 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk5rap1Q8BTW8 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Cdk5rap1Q8BTW8 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk5rap1Q8BTW8 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms